RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 CHMLP26374 656 aa18.4■□□□□ 0.54
CLK3-217ENST00000566126 QARSP47897 775 aaKnown RBP18.4■□□□□ 0.54
CLK3-217ENST00000566126 USP11P51784 963 aa18.4■□□□□ 0.54
CLK3-217ENST00000566126 C19orf57Q0VDD7 668 aa18.4■□□□□ 0.54
CLK3-217ENST00000566126 Q4G0T1 1027 aa18.4■□□□□ 0.54
CLK3-217ENST00000566126 IQCEQ6IPM2 695 aa18.4■□□□□ 0.54
CLK3-217ENST00000566126 RAB44Q7Z6P3 723 aaPredicted RBP18.4■□□□□ 0.54
CLK3-217ENST00000566126 RUFY2Q8WXA3 655 aa18.4■□□□□ 0.54
CLK3-217ENST00000566126 ZNF512Q96ME7 567 aaPredicted RBP18.4■□□□□ 0.54
CLK3-217ENST00000566126 XPNPEP1Q9NQW7 623 aa18.4■□□□□ 0.54
CLK3-217ENST00000566126 ASAH2Q9NR71 780 aa18.4■□□□□ 0.54
CLK3-217ENST00000566126 BRPF3Q9ULD4 1205 aa18.4■□□□□ 0.54
CLK3-217ENST00000566126 SHROOM3Q8TF72 1996 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 CCDC194A0A1B0GVG4 234 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 C1QL1O75973 258 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 B3GAT3O94766 335 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 GSPT1P15170 499 aaKnown RBP18.39■□□□□ 0.53
CLK3-217ENST00000566126 CDC27P30260 824 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 PI4KAP42356 2102 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 BRCC3P46736 316 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 FAM193AP78312 1265 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 CACNB1Q02641 598 aaPredicted RBP18.39■□□□□ 0.53
CLK3-217ENST00000566126 NUCB1Q02818 461 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 POU5F1BQ06416 359 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 TWF1Q12792 350 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 CAPSQ13938 189 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 ARHGAP29Q52LW3 1261 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 TMEM196Q5HYL7 178 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 STXBP5Q5T5C0 1151 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 ARID3BQ8IVW6 561 aaPredicted RBP18.39■□□□□ 0.53
CLK3-217ENST00000566126 LEMD2Q8NC56 503 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 C3orf58Q8NDZ4 430 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 ASAP3Q8TDY4 903 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 CHFRQ96EP1 664 aa18.39■□□□□ 0.53
CLK3-217ENST00000566126 SGSM2O43147 1006 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 RNF40O75150 1001 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 GNA11P29992 359 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 GBP1P32455 592 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 CLCNKBP51801 687 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 ARPP19P56211 112 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 MXD4Q14582 209 aaPredicted RBP18.38■□□□□ 0.53
CLK3-217ENST00000566126 CYP2U1Q7Z449 544 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 ELMOD1Q8N336 334 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 ETNPPLQ8TBG4 499 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 MTRQ99707 1265 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 LRRC3Q9BY71 257 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 CCDC86Q9H6F5 360 aaKnown RBP18.38■□□□□ 0.53
CLK3-217ENST00000566126 SCUBE2Q9NQ36 999 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 INVSQ9Y283 1065 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 RAXQ9Y2V3 346 aa18.38■□□□□ 0.53
CLK3-217ENST00000566126 TNRC6BQ9UPQ9 1833 aaKnown RBP18.37■□□□□ 0.53
CLK3-217ENST00000566126 MYO16Q9Y6X6 1858 aa18.37■□□□□ 0.53
CLK3-217ENST00000566126 URB1O60287 2271 aaKnown RBP18.37■□□□□ 0.53
CLK3-217ENST00000566126 ZBTB43O43298 467 aa18.37■□□□□ 0.53
CLK3-217ENST00000566126 RECQL4O94761 1208 aa18.37■□□□□ 0.53
CLK3-217ENST00000566126 TDP2O95551 362 aa18.37■□□□□ 0.53
CLK3-217ENST00000566126 SEMA3BQ13214 749 aa18.37■□□□□ 0.53
CLK3-217ENST00000566126 EBF1Q9UH73 591 aa18.37■□□□□ 0.53
CLK3-217ENST00000566126 EVLQ9UI08 416 aaPredicted RBP18.37■□□□□ 0.53
CLK3-217ENST00000566126 KIAA1549LQ6ZVL6 1849 aa18.37■□□□□ 0.53
CLK3-217ENST00000566126 A0A1W2PRU2 124 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 UPK3BL1B0FP48 263 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 UPK3BL2E5RIL1 263 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 ZBTB39O15060 712 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 TBX3O15119 743 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 EGFP01133 1207 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 PLA2G2AP14555 144 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 MAPK8P45983 427 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 TFDP1Q14186 410 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 HAUS6Q7Z4H7 955 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 TMC8Q8IU68 726 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 MDM1Q8TC05 714 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 CCDC12Q8WUD4 166 aaPredicted RBP18.36■□□□□ 0.53
CLK3-217ENST00000566126 ZNF462Q96JM2 2506 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 NFKBIZQ9BYH8 718 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 ADAMTS9Q9P2N4 1935 aa18.36■□□□□ 0.53
CLK3-217ENST00000566126 CYP3A7-CYP3A51PA0A087WV96 503 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 GOLGA8AA7E2F4 631 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 GOLGA8BA8MQT2 603 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 APBB3O95704 486 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 BCKDHBP21953 392 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 CYP3A7P24462 503 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 YWHABP31946 246 aaKnown RBP18.35■□□□□ 0.53
CLK3-217ENST00000566126 RDXP35241 583 aaKnown RBP18.35■□□□□ 0.53
CLK3-217ENST00000566126 GRSF1Q12849 480 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLK3-217ENST00000566126 LMAN2Q12907 356 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 UPP1Q16831 310 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 ITPRIPL2Q3MIP1 535 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 TRIM61Q5EBN2 209 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 TPGS2Q68CL5 300 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 TBCKQ8TEA7 893 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 PIGKQ92643 395 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 GOLGA2P5Q9HBQ8 144 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 FBXL5Q9UKA1 691 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 UNC79Q9P2D8 2635 aa18.35■□□□□ 0.53
CLK3-217ENST00000566126 GON4LQ3T8J9 2241 aa18.34■□□□□ 0.53
CLK3-217ENST00000566126 HECTD1Q9ULT8 2610 aa18.34■□□□□ 0.53
CLK3-217ENST00000566126 PTPRDP23468 1912 aa18.34■□□□□ 0.53
CLK3-217ENST00000566126 TTLL13PA6NNM8 815 aa18.34■□□□□ 0.53
CLK3-217ENST00000566126 TRDMT1O14717 391 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms