RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 LMNAP02545 664 aaKnown RBP9.37□□□□□ -0.91
CAPN3-213ENST00000565173 ADRB2P07550 413 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 PLA2G4BP0C869 781 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 HARSP12081 509 aaKnown RBP9.37□□□□□ -0.91
CAPN3-213ENST00000565173 ELF1P32519 619 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 SMTNP53814 917 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 ARPP19P56211 112 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 PFKPQ01813 784 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 STRN3Q13033 797 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 FZD5Q13467 585 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 NOLC1Q14978 699 aaKnown RBP eCLIP9.37□□□□□ -0.91
CAPN3-213ENST00000565173 ZRSR1Q15695 479 aaKnown RBP9.37□□□□□ -0.91
CAPN3-213ENST00000565173 TPGS2Q68CL5 300 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 MCTP1Q6DN14 999 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 ZNF687Q8N1G0 1237 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 BEST2Q8NFU1 509 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 DDX12PQ92771 950 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 CLDN23Q96B33 292 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 ELSPBP1Q96BH3 223 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 TMX3Q96JJ7 454 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 CORO1BQ9BR76 489 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 PLEKHA5Q9HAU0 1116 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 CEP72Q9P209 647 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 ANKFY1Q9P2R3 1169 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 NUB1Q9Y5A7 615 aa9.37□□□□□ -0.91
CAPN3-213ENST00000565173 CITO14578 2027 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 M0QZQ0 153 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 PRRG1O14668 218 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 OAZ2O95190 189 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 LRG1P02750 347 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 CXCL8P10145 99 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 GJB2P29033 226 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 LRPAP1P30533 357 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 TNFSF9P41273 254 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 AARSP49588 968 aaKnown RBP eCLIP9.36□□□□□ -0.91
CAPN3-213ENST00000565173 ZNF131P52739 623 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 EPHA5P54756 1037 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 NCKAP1LP55160 1127 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 CACNB1Q02641 598 aaPredicted RBP9.36□□□□□ -0.91
CAPN3-213ENST00000565173 SPAG1Q07617 926 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 RABEP1Q15276 862 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 ZNF528Q3MIS6 628 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 CTXN3Q4LDR2 81 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 FAM78AQ5JUQ0 283 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 ZBTB41Q5SVQ8 909 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 ARL6IP4Q66PJ3 421 aaKnown RBP9.36□□□□□ -0.91
CAPN3-213ENST00000565173 RNF19BQ6ZMZ0 732 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 HAUS6Q7Z4H7 955 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 HS6ST3Q8IZP7 471 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 SUMF1Q8NBK3 374 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 NELL1Q92832 810 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 ASB16Q96NS5 453 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 LTB4R2Q9NPC1 389 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 HEBP1Q9NRV9 189 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 AFF4Q9UHB7 1163 aaKnown RBP9.36□□□□□ -0.91
CAPN3-213ENST00000565173 MAFFQ9ULX9 164 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 PCDHB8Q9UN66 801 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 INSL5Q9Y5Q6 135 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 PDCD11Q14690 1871 aaKnown RBP9.36□□□□□ -0.91
CAPN3-213ENST00000565173 CACNA1AO00555 2505 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 FANCMQ8IYD8 2048 aa9.36□□□□□ -0.91
CAPN3-213ENST00000565173 LACTBL1A8MY62 500 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 ZNF197O14709 1029 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 PIGRP01833 764 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 CLTAP09496 248 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 CYP3A5P20815 502 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 TARSP26639 723 aaKnown RBP9.35□□□□□ -0.91
CAPN3-213ENST00000565173 MCM4P33991 863 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 ID4P47928 161 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 FOXK2Q01167 660 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 GRIN1Q05586 938 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 ADCY1Q08828 1119 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 TWF1Q12792 350 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 UBXN2BQ14CS0 331 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 ENOX2Q16206 610 aaKnown RBP9.35□□□□□ -0.91
CAPN3-213ENST00000565173 OTOGLQ3ZCN5 2332 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 ZNF280DQ6N043 979 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 SLC39A4Q6P5W5 647 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 TPRG1Q6ZUI0 275 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 MAP4K3Q8IVH8 894 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 APPL2Q8NEU8 664 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 KCNG4Q8TDN1 519 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 AK8Q96MA6 479 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 FIZ1Q96SL8 496 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 NELL2Q99435 816 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 REEP2Q9BRK0 252 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 LRRC3Q9BY71 257 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 BCO2Q9BYV7 579 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 CRISPLD1Q9H336 500 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 TRPV4Q9HBA0 871 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 BLOC1S4Q9NUP1 217 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 LARSQ9P2J5 1176 aaKnown RBP9.35□□□□□ -0.91
CAPN3-213ENST00000565173 FBXO4Q9UKT5 387 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 ODF2LQ9ULJ1 636 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 TBX20Q9UMR3 447 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 KIF3AQ9Y496 699 aa9.35□□□□□ -0.91
CAPN3-213ENST00000565173 TIMM13Q9Y5L4 95 aaPredicted RBP9.35□□□□□ -0.91
CAPN3-213ENST00000565173 NCANO14594 1321 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 A0A0B4J269 797 aa9.34□□□□□ -0.91
CAPN3-213ENST00000565173 H0YCG3 227 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms