RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CNTN6Q9UQ52 1028 aa19.36■□□□□ 0.69
COMMD4-208ENST00000563220 PCDHB4Q9Y5E5 795 aa19.36■□□□□ 0.69
COMMD4-208ENST00000563220 ITGB3P05106 788 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 AKAP5P24588 427 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 PDE6CP51160 858 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 CDR2Q01850 454 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 TMEM270Q6UE05 265 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 ALKAL1Q6UXT8 129 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 KIF12Q96FN5 646 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 SNX27Q96L92 541 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 NIF3L1Q9GZT8 377 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 RNF39Q9H2S5 420 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 INTUQ9ULD6 942 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 ANK1P16157 1881 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 MOXD2PA6NHM9 499 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 BTNL10A8MVZ5 291 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 ENC1O14682 589 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 TACC1O75410 805 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 THPOP40225 353 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 GLIPR1L2Q4G1C9 344 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 TSEN34Q9BSV6 310 aaKnown RBP19.35■□□□□ 0.69
COMMD4-208ENST00000563220 ST3GAL5Q9UNP4 418 aa19.35■□□□□ 0.69
COMMD4-208ENST00000563220 ATP8B3O60423 1300 aa19.34■□□□□ 0.69
COMMD4-208ENST00000563220 RPS6KA5O75582 802 aa19.34■□□□□ 0.69
COMMD4-208ENST00000563220 RECQL4O94761 1208 aa19.34■□□□□ 0.69
COMMD4-208ENST00000563220 NT5DC4Q86YG4 428 aa19.34■□□□□ 0.69
COMMD4-208ENST00000563220 TRIM58Q8NG06 486 aa19.34■□□□□ 0.69
COMMD4-208ENST00000563220 GLT1D1Q96MS3 346 aa19.34■□□□□ 0.69
COMMD4-208ENST00000563220 NOX5Q96PH1 765 aa19.34■□□□□ 0.69
COMMD4-208ENST00000563220 APOL6Q9BWW8 343 aa19.34■□□□□ 0.69
COMMD4-208ENST00000563220 ISCUQ9H1K1 167 aa19.34■□□□□ 0.69
COMMD4-208ENST00000563220 RNF19AQ9NV58 838 aa19.34■□□□□ 0.69
COMMD4-208ENST00000563220 DPP3Q9NY33 737 aa19.34■□□□□ 0.69
COMMD4-208ENST00000563220 POLIQ9UNA4 740 aa19.34■□□□□ 0.69
COMMD4-208ENST00000563220 PCDHB2Q9Y5E7 798 aa19.34■□□□□ 0.69
COMMD4-208ENST00000563220 ATP1A1P05023 1023 aaKnown RBP19.33■□□□□ 0.69
COMMD4-208ENST00000563220 WEE2P0C1S8 567 aa19.33■□□□□ 0.69
COMMD4-208ENST00000563220 ASPAP45381 313 aa19.33■□□□□ 0.69
COMMD4-208ENST00000563220 YARSP54577 528 aaKnown RBP19.33■□□□□ 0.69
COMMD4-208ENST00000563220 NAP1L1P55209 391 aaKnown RBP19.33■□□□□ 0.69
COMMD4-208ENST00000563220 ZBTB6Q15916 424 aa19.33■□□□□ 0.69
COMMD4-208ENST00000563220 RBBP8NLQ8NC74 664 aaPredicted RBP19.33■□□□□ 0.69
COMMD4-208ENST00000563220 SMG8Q8ND04 991 aaKnown RBP19.33■□□□□ 0.69
COMMD4-208ENST00000563220 TAF4BQ92750 862 aa19.33■□□□□ 0.69
COMMD4-208ENST00000563220 AGO3Q9H9G7 860 aaKnown RBP19.33■□□□□ 0.69
COMMD4-208ENST00000563220 NXF1Q9UBU9 619 aaKnown RBP19.33■□□□□ 0.69
COMMD4-208ENST00000563220 AGAP1Q9UPQ3 857 aa19.33■□□□□ 0.69
COMMD4-208ENST00000563220 MRFAP1Q9Y605 127 aa19.33■□□□□ 0.69
COMMD4-208ENST00000563220 BRCA2P51587 3418 aa19.33■□□□□ 0.69
COMMD4-208ENST00000563220 FTLP02792 175 aaPredicted RBP19.33■□□□□ 0.68
COMMD4-208ENST00000563220 RPLP2P05387 115 aaKnown RBP19.33■□□□□ 0.68
COMMD4-208ENST00000563220 POLR2BP30876 1174 aaKnown RBP19.33■□□□□ 0.68
COMMD4-208ENST00000563220 AMPD2Q01433 879 aa19.33■□□□□ 0.68
COMMD4-208ENST00000563220 PTPN11Q06124 597 aaPredicted RBP19.33■□□□□ 0.68
COMMD4-208ENST00000563220 NFX1Q12986 1120 aaKnown RBP19.33■□□□□ 0.68
COMMD4-208ENST00000563220 PTK7Q13308 1070 aa19.33■□□□□ 0.68
COMMD4-208ENST00000563220 TRIM71Q2Q1W2 868 aaKnown RBP19.33■□□□□ 0.68
COMMD4-208ENST00000563220 WDR72Q3MJ13 1102 aa19.33■□□□□ 0.68
COMMD4-208ENST00000563220 TWF2Q6IBS0 349 aaKnown RBP19.33■□□□□ 0.68
COMMD4-208ENST00000563220 SCARA5Q6ZMJ2 495 aa19.33■□□□□ 0.68
COMMD4-208ENST00000563220 CISHQ9NSE2 258 aa19.33■□□□□ 0.68
COMMD4-208ENST00000563220 CNTN3Q9P232 1028 aa19.33■□□□□ 0.68
COMMD4-208ENST00000563220 DERAQ9Y315 318 aa19.33■□□□□ 0.68
COMMD4-208ENST00000563220 IPPQ9Y573 584 aa19.33■□□□□ 0.68
COMMD4-208ENST00000563220 A0A1W2PQ45 241 aaPredicted RBP19.32■□□□□ 0.68
COMMD4-208ENST00000563220 A0A1W2PQY0 241 aa19.32■□□□□ 0.68
COMMD4-208ENST00000563220 TMEM253P0C7T8 217 aa19.32■□□□□ 0.68
COMMD4-208ENST00000563220 GZMAP12544 262 aa19.32■□□□□ 0.68
COMMD4-208ENST00000563220 CD58P19256 250 aa19.32■□□□□ 0.68
COMMD4-208ENST00000563220 ABCB4P21439 1286 aa19.32■□□□□ 0.68
COMMD4-208ENST00000563220 ZNF132P52740 706 aa19.32■□□□□ 0.68
COMMD4-208ENST00000563220 BPIFB4P59827 614 aa19.32■□□□□ 0.68
COMMD4-208ENST00000563220 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.32■□□□□ 0.68
COMMD4-208ENST00000563220 KLK14Q9P0G3 267 aa19.32■□□□□ 0.68
COMMD4-208ENST00000563220 PARP2Q9UGN5 583 aa19.32■□□□□ 0.68
COMMD4-208ENST00000563220 ITGA11Q9UKX5 1188 aa19.32■□□□□ 0.68
COMMD4-208ENST00000563220 ANKRD62A6NC57 917 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 ATICP31939 592 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 RBP5P82980 135 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 ZNF667Q5HYK9 610 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 GLRA4Q5JXX5 417 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 PAPD7Q5XG87 772 aaKnown RBP19.31■□□□□ 0.68
COMMD4-208ENST00000563220 ARRDC4Q8NCT1 418 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 LRRN4CLQ8ND94 238 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 C18orf25Q96B23 403 aaPredicted RBP19.31■□□□□ 0.68
COMMD4-208ENST00000563220 ARHGEF26Q96DR7 871 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 ALS2CR12Q96Q35 445 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 BEGAINQ9BUH8 593 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 THAP2Q9H0W7 228 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 UNC93B1Q9H1C4 597 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 VRTNQ9H8Y1 702 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 NOD1Q9Y239 953 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 A0A0A6YYK5 440 aaPredicted RBP19.31■□□□□ 0.68
COMMD4-208ENST00000563220 RTN2O75298 545 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 PALMO75781 387 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 SLU7O95391 586 aaKnown RBP19.31■□□□□ 0.68
COMMD4-208ENST00000563220 TFRCP02786 760 aaKnown RBP19.31■□□□□ 0.68
COMMD4-208ENST00000563220 CDH8P55286 799 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 XKR4Q5GH76 650 aa19.31■□□□□ 0.68
COMMD4-208ENST00000563220 FBXO47Q5MNV8 452 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms