RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 CEACAM1P13688 526 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 YWHABP31946 246 aaKnown RBP10.22□□□□□ -0.77
SMAD3-215ENST00000560424 VIPR2P41587 438 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 RAP1GAPP47736 663 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 PXNP49023 591 aaPredicted RBP10.22□□□□□ -0.77
SMAD3-215ENST00000560424 ARPP19P56211 112 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 NLRP5P59047 1200 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 CREB5Q02930 508 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 PRSS36Q5K4E3 855 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 PLA2G2CQ5R387 149 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 SYNPOQ8N3V7 929 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 ZNF579Q8NAF0 562 aaKnown RBP10.22□□□□□ -0.77
SMAD3-215ENST00000560424 LEMD2Q8NC56 503 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 TCEAL4Q96EI5 215 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 ZNF512Q96ME7 567 aaPredicted RBP10.22□□□□□ -0.77
SMAD3-215ENST00000560424 GPR88Q9GZN0 384 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 ASAH2Q9NR71 780 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 BACE2Q9Y5Z0 518 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 SPAG17Q6Q759 2223 aa10.22□□□□□ -0.77
SMAD3-215ENST00000560424 CCDC163A0A0D9SF12 145 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 ARHGEF37A1IGU5 675 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 VPS37CA5D8V6 355 aaPredicted RBP10.21□□□□□ -0.77
SMAD3-215ENST00000560424 SPECC1L-ADORA2AF8WAN1 911 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 H3BQV1 296 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 CHADO15335 359 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 B4GALT5O43286 388 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 ATG13O75143 517 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 AKAP3O75969 853 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 RHOBTB1O94844 696 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 TDP2O95551 362 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 FGFR3P22607 806 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 RDXP35241 583 aaKnown RBP10.21□□□□□ -0.77
SMAD3-215ENST00000560424 SOX9P48436 509 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 ROR1Q01973 937 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 MBTD1Q05BQ5 628 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 RESTQ13127 1097 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 PON2Q15165 354 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 TCEAL6Q6IPX3 200 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 BRAPQ7Z569 592 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 RALGPS2Q86X27 583 aaPredicted RBP10.21□□□□□ -0.77
SMAD3-215ENST00000560424 ZNF461Q8TAF7 563 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 TTC8Q8TAM2 541 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 GATA6Q92908 595 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 TCEAL3Q969E4 200 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 C8orf76Q96K31 380 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 ADPGKQ9BRR6 497 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 LXNQ9BS40 222 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 TMEM9BQ9NQ34 198 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 VPS54Q9P1Q0 977 aa10.21□□□□□ -0.77
SMAD3-215ENST00000560424 DDX25Q9UHL0 483 aaKnown RBP10.21□□□□□ -0.77
SMAD3-215ENST00000560424 COL4A2P08572 1712 aa10.21□□□□□ -0.78
SMAD3-215ENST00000560424 SPEGQ15772 3267 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 A0A1B0GUA9 196 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 TAF4O00268 1085 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 EML1O00423 815 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 CAVIN2O95810 425 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 XBP1P17861 261 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 U2AF2P26368 475 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMAD3-215ENST00000560424 TKTP29401 623 aaKnown RBP10.2□□□□□ -0.78
SMAD3-215ENST00000560424 CTHP32929 405 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 POU5F1BQ06416 359 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 CAPSQ13938 189 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 KARSQ15046 597 aaKnown RBP10.2□□□□□ -0.78
SMAD3-215ENST00000560424 PTPAQ15257 358 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 SKOR2Q2VWA4 1001 aaPredicted RBP10.2□□□□□ -0.78
SMAD3-215ENST00000560424 KIAA1211LQ6NV74 962 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 B3GNT9Q6UX72 402 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 IFNLR1Q8IU57 520 aaPredicted RBP10.2□□□□□ -0.78
SMAD3-215ENST00000560424 C4orf19Q8IY42 314 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 ETNPPLQ8TBG4 499 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 DDX27Q96GQ7 796 aaKnown RBP10.2□□□□□ -0.78
SMAD3-215ENST00000560424 ZSWIM3Q96MP5 696 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 TMEM121BQ9BXQ6 578 aaPredicted RBP10.2□□□□□ -0.78
SMAD3-215ENST00000560424 SLC26A6Q9BXS9 759 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 SLC32A1Q9H598 525 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 SH3GLB2Q9NR46 395 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 SNTG2Q9NY99 539 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 INSL5Q9Y5Q6 135 aa10.2□□□□□ -0.78
SMAD3-215ENST00000560424 IGF2RP11717 2491 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 VWA8A3KMH1 1905 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 MYBPHLA2RUH7 354 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 LRRIQ4A6NIV6 560 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 H7C4K7 107 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 PTGESO14684 152 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 KHNYNO15037 678 aaKnown RBP10.19□□□□□ -0.78
SMAD3-215ENST00000560424 N4BP3O15049 544 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 EXTL3O43909 919 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 RECQL4O94761 1208 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 TOP3BO95985 862 aaKnown RBP10.19□□□□□ -0.78
SMAD3-215ENST00000560424 PRKCBP05771 671 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 ATF2P15336 505 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 GJA1P17302 382 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 CSRP1P21291 193 aaKnown RBP10.19□□□□□ -0.78
SMAD3-215ENST00000560424 GBP1P32455 592 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 CCR2P41597 374 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 TWF1Q12792 350 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 PPP2R5CQ13362 524 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 TEAD2Q15562 447 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 AMHR2Q16671 573 aa10.19□□□□□ -0.78
SMAD3-215ENST00000560424 UAP1L1Q3KQV9 507 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms