RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 FGFR3P22607 806 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 LRPAP1P30533 357 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 POLR2BP30876 1174 aaKnown RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 OR1D2P34982 312 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 STX17P56962 302 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 CYP24A1Q07973 514 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 ELAVL2Q12926 359 aaKnown RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 BFSP1Q12934 665 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 ADAM9Q13443 819 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 PSMD5Q16401 504 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 SNRNP35Q16560 246 aaKnown RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 DUOXA2Q1HG44 320 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 CTC1Q2NKJ3 1217 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 RARS2Q5T160 578 aaKnown RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 ZNF658Q5TYW1 1059 aaPredicted RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 ANKRD40Q6AI12 368 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 PTCRAQ6ISU1 281 aaPredicted RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 KLHL10Q6JEL2 608 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 ANKRD54Q6NXT1 300 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 RSPO2Q6UXX9 243 aaPredicted RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 RNF168Q8IYW5 571 aaPredicted RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 GUF1Q8N442 669 aaKnown RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 C1orf127Q8N9H9 656 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 GOLGA5Q8TBA6 731 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 FEZF2Q8TBJ5 459 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 PLEKHO2Q8TD55 490 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 ZNF516Q92618 1163 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 ELMO3Q96BJ8 720 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 ANKRD36BP1Q96IX9 119 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 SENP8Q96LD8 212 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 FBXL18Q96ME1 805 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 NECAB3Q96P71 396 aaPredicted RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 GBP4Q96PP9 640 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 CLSTN3Q9BQT9 956 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 MTMR12Q9C0I1 747 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 RXFP1Q9HBX9 757 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.25□□□□□ -0.93
USP3-217ENST00000560070 DMAC2Q9NW81 257 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 CD207Q9UJ71 328 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 CDH22Q9UJ99 828 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 R3HCC1Q9Y3T6 440 aaKnown RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 UBE4BO95155 1302 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 PTPRJQ12913 1337 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 LAMA2P24043 3122 aaKnown RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 ANO9A1A5B4 782 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 GRXCR2A6NFK2 248 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 TMEM189-UBE2V1I3L0A0 370 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 PIRO00625 290 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 CYB561D2O14569 222 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 KIAA0391O15091 583 aaKnown RBP9.24□□□□□ -0.93
USP3-217ENST00000560070 TGM5O43548 720 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 PHACTR2O75167 634 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 ADH1AP07327 375 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 BMP1P13497 986 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 IL9P15248 144 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 CLCN4P51793 760 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 PMS1P54277 932 aaKnown RBP9.24□□□□□ -0.93
USP3-217ENST00000560070 LILRA4P59901 499 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 SNRPFP62306 86 aaKnown RBP9.24□□□□□ -0.93
USP3-217ENST00000560070 DLG4P78352 724 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 RBP5P82980 135 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 PSMD6Q15008 389 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 AAK1Q2M2I8 961 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 LEXMQ3ZCV2 418 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 CTXN3Q4LDR2 81 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 VARS2Q5ST30 1063 aaKnown RBP9.24□□□□□ -0.93
USP3-217ENST00000560070 SYCE2Q6PIF2 218 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 TMC5Q6UXY8 1006 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 TRAPPC11Q7Z392 1133 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 USP37Q86T82 979 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 PPFIBP1Q86W92 1011 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 SPATA20Q8TB22 786 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 PIK3R5Q8WYR1 880 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 CASP10Q92851 521 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 SUSD3Q96L08 255 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 TSPAN18Q96SJ8 248 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 MMRN2Q9H8L6 949 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 INTS13Q9NVM9 706 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 FNIP2Q9P278 1114 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 CGNQ9P2M7 1197 aaKnown RBP9.24□□□□□ -0.93
USP3-217ENST00000560070 PCDHB8Q9UN66 801 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 TRAF3IP3Q9Y228 551 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 FRMD4BQ9Y2L6 1034 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 C2CD2Q9Y426 696 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 IRAK3Q9Y616 596 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 CDY1Q9Y6F8 540 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 CHD9Q3L8U1 2897 aa9.24□□□□□ -0.93
USP3-217ENST00000560070 MICAL3Q7RTP6 2002 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 CCDC195A0A1B0GUA6 201 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 TRIM49BA6NDI0 452 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 LRRIQ3A6PVS8 624 aaPredicted RBP9.23□□□□□ -0.93
USP3-217ENST00000560070 KPNA7A9QM74 516 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 H7C4K7 107 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 MBTPS2O43462 519 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 GALR2O43603 387 aaPredicted RBP9.23□□□□□ -0.93
USP3-217ENST00000560070 RFPL2O75678 378 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 AKAP3O75969 853 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 GLUD1P00367 558 aa9.23□□□□□ -0.93
USP3-217ENST00000560070 OR4Q2P0C623 313 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms