RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 HERC6Q8IVU3 1022 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 HACE1Q8IYU2 909 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 SEPT8Q92599 483 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 ZNF689Q96CS4 500 aaPredicted RBP8.28□□□□□ -1.08
LRRC28-211ENST00000558890 SCLT1Q96NL6 688 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 NOX5Q96PH1 765 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 ACO2Q99798 780 aaKnown RBP8.28□□□□□ -1.08
LRRC28-211ENST00000558890 ADPGKQ9BRR6 497 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 FGFBP2Q9BYJ0 223 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 ELAC1Q9H777 363 aaKnown RBP8.28□□□□□ -1.08
LRRC28-211ENST00000558890 POLD4Q9HCU8 107 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 UBN1Q9NPG3 1134 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 RNF19AQ9NV58 838 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 ARHGAP20Q9P2F6 1191 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 RAB21Q9UL25 225 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 PCDHB8Q9UN66 801 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 FHOD1Q9Y613 1164 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 SLC4A7Q9Y6M7 1214 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 PTPRSQ13332 1948 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 CITO14578 2027 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 A0A0B4J269 797 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 SFI1A8K8P3 1242 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 ABLIM1O14639 778 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 CLDN3O15551 220 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 PJA2O43164 708 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 PRPF6O94906 941 aaKnown RBP8.27□□□□□ -1.09
LRRC28-211ENST00000558890 SEC31AO94979 1220 aaKnown RBP8.27□□□□□ -1.09
LRRC28-211ENST00000558890 GJB5O95377 273 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 EOMESO95936 686 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 ABL1P00519 1130 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 ADRB2P07550 413 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 RHOXF2BP0C7M4 288 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 SRGAP2CP0DJJ0 459 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 MYBP10242 640 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 ATP2A2P16615 1042 aaKnown RBP8.27□□□□□ -1.09
LRRC28-211ENST00000558890 ZSCAN20P17040 1043 aaPredicted RBP8.27□□□□□ -1.09
LRRC28-211ENST00000558890 TCP1P17987 556 aaKnown RBP8.27□□□□□ -1.09
LRRC28-211ENST00000558890 FGFR4P22455 802 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 NMT1P30419 496 aaKnown RBP8.27□□□□□ -1.09
LRRC28-211ENST00000558890 HOXD13P35453 343 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 LIG4P49917 911 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 RABGGTBP53611 331 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 NAP1L1P55209 391 aaKnown RBP8.27□□□□□ -1.09
LRRC28-211ENST00000558890 POLR2FP61218 127 aaKnown RBP8.27□□□□□ -1.09
LRRC28-211ENST00000558890 CYP27A1Q02318 531 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 DMTNQ08495 405 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 KLHL30Q0D2K2 578 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 KCNMA1Q12791 1236 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 LONRF2Q1L5Z9 754 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 DCAF17Q5H9S7 520 aaPredicted RBP8.27□□□□□ -1.09
LRRC28-211ENST00000558890 CCDC181Q5TID7 509 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 ATF7IP2Q5U623 682 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 MAEAQ7L5Y9 396 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 CATSPER4Q7RTX7 472 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 HDXQ7Z353 690 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 SPRED2Q7Z698 418 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 ZNF598Q86UK7 904 aaKnown RBP8.27□□□□□ -1.09
LRRC28-211ENST00000558890 VPS36Q86VN1 386 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 FMNL3Q8IVF7 1028 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 CD302Q8IX05 232 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 SP7Q8TDD2 431 aaPredicted RBP8.27□□□□□ -1.09
LRRC28-211ENST00000558890 HNRNPLLQ8WVV9 542 aaKnown RBP8.27□□□□□ -1.09
LRRC28-211ENST00000558890 SPAG5Q96R06 1193 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 PPP1R16BQ96T49 567 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 RHOXF2Q9BQY4 288 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 EPC1Q9H2F5 836 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 ANKZF1Q9H8Y5 726 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 PLEKHA5Q9HAU0 1116 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 NLRC4Q9NPP4 1024 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 AGPAT3Q9NRZ7 376 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 RGS18Q9NS28 235 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 DMAC2Q9NW81 257 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 JRKLQ9Y4A0 524 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 HYOU1Q9Y4L1 999 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 PCDHA11Q9Y5I1 949 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 BZW2Q9Y6E2 419 aaKnown RBP8.27□□□□□ -1.09
LRRC28-211ENST00000558890 BRWD1Q9NSI6 2320 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 EYSQ5T1H1 3165 aa8.27□□□□□ -1.09
LRRC28-211ENST00000558890 ANK1P16157 1881 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 A0A0U1RQF3 1178 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 TARSL2A2RTX5 802 aaKnown RBP8.26□□□□□ -1.09
LRRC28-211ENST00000558890 GTPBP10A4D1E9 387 aaKnown RBP8.26□□□□□ -1.09
LRRC28-211ENST00000558890 LCHNA4D1U4 455 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 RCCD1A6NED2 376 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 TTLL13PA6NNM8 815 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 ENC1O14682 589 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 OGTO15294 1046 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 TGFB1I1O43294 461 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 HOXA2O43364 376 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 FAM189A1O60320 539 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 MOCS3O95396 460 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 EDN1P05305 212 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 PLEKP08567 350 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-211ENST00000558890 ACTN1P12814 892 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 ATF7P17544 494 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-211ENST00000558890 ARF4P18085 180 aaPredicted RBP8.26□□□□□ -1.09
LRRC28-211ENST00000558890 PAX3P23760 479 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 GRM5P41594 1212 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 PAFAH1B1P43034 410 aa8.26□□□□□ -1.09
LRRC28-211ENST00000558890 KCNH2Q12809 1159 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms