RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 GUF1Q8N442 669 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 SMRP1Q8NCR6 262 aa17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 AUTS2Q8WXX7 1259 aa17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 FBXL18Q96ME1 805 aa17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 RIPOR3Q96MK2 946 aa17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 GBP4Q96PP9 640 aa17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 CXCL16Q9H2A7 254 aa17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 DPP3Q9NY33 737 aa17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 TUBGCP4Q9UGJ1 667 aa17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 ITGA11Q9UKX5 1188 aa17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 DSEQ9UL01 958 aa17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 PCDHB8Q9UN66 801 aa17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 BACE2Q9Y5Z0 518 aa17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 VWA8A3KMH1 1905 aa17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 SPTBN5Q9NRC6 3674 aaKnown RBP17.09■□□□□ 0.33
RABGGTA-205ENST00000558534 GRXCR2A6NFK2 248 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 TEX28O15482 410 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 LINC01565O15544 149 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 TGFB1I1O43294 461 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 EXOC3O60645 756 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 GLP2RO95838 553 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 ODC1P11926 461 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 GTF2F1P35269 517 aaKnown RBP eCLIP17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 TAF6P49848 677 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 AP3M2P53677 418 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 SV2CQ496J9 727 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 RTP2Q5QGT7 225 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 ZNF280DQ6N043 979 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 TAS1R1Q7RTX1 841 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 SLC9A9Q8IVB4 645 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 KIAA0895Q8NCT3 520 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 RABGGTAQ92696 567 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 CLEC1BQ9P126 229 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 MTRRQ9UBK8 725 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 MAFFQ9ULX9 164 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 BARX2Q9UMQ3 279 aaPredicted RBP17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 FRMD4BQ9Y2L6 1034 aa17.08■□□□□ 0.32
RABGGTA-205ENST00000558534 XIRP2A4UGR9 3374 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 F8W810 466 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 M0QZQ0 153 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 MBTPS2O43462 519 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 NFICP08651 508 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 BMP1P13497 986 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 MTHFRP42898 656 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 CYP2J2P51589 502 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 TFAMQ00059 246 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 SPAG1Q07617 926 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 SMAD2Q15796 467 aaKnown RBP17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 DUOXA2Q1HG44 320 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 LIN9Q5TKA1 542 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 C9orf57Q5W0N0 161 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 METTL23Q86XA0 190 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 WDR49Q8IV35 697 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 GLIS3Q8NEA6 775 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 LNX1Q8TBB1 728 aaPredicted RBP17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 SLC22A17Q8WUG5 538 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 TSG101Q99816 390 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 CACNG4Q9UBN1 327 aa17.07■□□□□ 0.32
RABGGTA-205ENST00000558534 PLXNA3P51805 1871 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 ANO9A1A5B4 782 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 GOLGA8IPA6NC78 632 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 GOLGA8JA6NMD2 632 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 TULP1O00294 542 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 CLIC2O15247 247 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 MEFVO15553 781 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 PRR29P0C7W0 189 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 TYMPP19971 482 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 HOXD13P35453 343 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 BRCC3P46736 316 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 AARSP49588 968 aaKnown RBP eCLIP17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 KCNQ1P51787 676 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 YWHAHQ04917 246 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 MYO1EQ12965 1108 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 NFIL3Q16649 462 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 COBLL1Q53SF7 1204 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 ZNF658Q5TYW1 1059 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 C15orf39Q6ZRI6 1047 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 CLEC17AQ6ZS10 378 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 CCDC149Q6ZUS6 474 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 LRRC52Q8N7C0 313 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 C3orf58Q8NDZ4 430 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 CMASQ8NFW8 434 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 ADAMTS19Q8TE59 1207 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 UHRF1Q96T88 793 aaPredicted RBP17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 RHOBTB2Q9BYZ6 727 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 ADAM7Q9H2U9 754 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 ZDHHC7Q9NXF8 308 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 TRAF3IP3Q9Y228 551 aa17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 TCF20Q9UGU0 1960 aaKnown RBP17.06■□□□□ 0.32
RABGGTA-205ENST00000558534 NCOR1O75376 2440 aa17.05■□□□□ 0.32
RABGGTA-205ENST00000558534 PIRO00625 290 aa17.05■□□□□ 0.32
RABGGTA-205ENST00000558534 MAPK13O15264 365 aa17.05■□□□□ 0.32
RABGGTA-205ENST00000558534 EPCAMP16422 314 aa17.05■□□□□ 0.32
RABGGTA-205ENST00000558534 TNNI1P19237 187 aa17.05■□□□□ 0.32
RABGGTA-205ENST00000558534 TKTP29401 623 aaKnown RBP17.05■□□□□ 0.32
RABGGTA-205ENST00000558534 LILRA4P59901 499 aa17.05■□□□□ 0.32
RABGGTA-205ENST00000558534 RBP5P82980 135 aa17.05■□□□□ 0.32
RABGGTA-205ENST00000558534 DLX2Q07687 328 aaPredicted RBP17.05■□□□□ 0.32
RABGGTA-205ENST00000558534 PNOCQ13519 176 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms