RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 WDR19Q8NEZ3 1342 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 MYO9BQ13459 2157 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 SMCO2A6NFE2 343 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 NOTOA8MTQ0 251 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 SEPT4O43236 478 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 CYTH3O43739 400 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 NRDCO43847 1150 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 MSCO60682 206 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 PPP1R11O60927 126 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-238ENST00000556288 MYL3P08590 195 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 AKR1A1P14550 325 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 PDIA3P30101 505 aaKnown RBP5.31□□□□□ -1.56
ATXN3-238ENST00000556288 HOXC12P31275 282 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 ADCYAP1R1P41586 468 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 KCNJ6P48051 423 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 GALK1P51570 392 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 BEX3Q00994 111 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 SERINC3Q13530 473 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 SNX17Q15036 470 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 STXBP2Q15833 593 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 MTERF2Q49AM1 385 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 HSF5Q4G112 596 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-238ENST00000556288 LCE5AQ5TCM9 118 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 IQSEC1Q6DN90 963 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 GALNT18Q6P9A2 607 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 CPLX2Q6PUV4 134 aaKnown RBP5.31□□□□□ -1.56
ATXN3-238ENST00000556288 USP17L6PQ6QN14 398 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 MPZL3Q6UWV2 235 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 RNF180Q86T96 592 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 FBXO16Q8IX29 292 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-238ENST00000556288 NECAB1Q8N987 351 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 FAM133AQ8N9E0 248 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 NSUN6Q8TEA1 469 aaKnown RBP5.31□□□□□ -1.56
ATXN3-238ENST00000556288 DIS3LQ8TF46 1054 aaKnown RBP5.31□□□□□ -1.56
ATXN3-238ENST00000556288 PHKBQ93100 1093 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 LIN37Q96GY3 246 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-238ENST00000556288 CCDC140Q96MF4 163 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 UIMC1Q96RL1 719 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 JMJD8Q96S16 334 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 SRPK1Q96SB4 655 aaKnown RBP5.31□□□□□ -1.56
ATXN3-238ENST00000556288 MAP3K14Q99558 947 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 MTA3Q9BTC8 594 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 HTATIP2Q9BUP3 242 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 C22orf23Q9BZE7 217 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 WDR11Q9BZH6 1224 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 NKX2-4Q9H2Z4 354 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 C11orf49Q9H6J7 331 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 PSTPIP2Q9H939 334 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 PFDN2Q9UHV9 154 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 SCN5AQ14524 2016 aa5.31□□□□□ -1.56
ATXN3-238ENST00000556288 MYH11P35749 1972 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 NPHP3-ACAD11A0A0J9YXS1 232 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-238ENST00000556288 SNRPB2P08579 225 aaKnown RBP5.3□□□□□ -1.56
ATXN3-238ENST00000556288 TXNP10599 105 aaKnown RBP5.3□□□□□ -1.56
ATXN3-238ENST00000556288 CYBAP13498 195 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 PRKCAP17252 672 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 SYN1P17600 705 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 PAMP19021 973 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 PTGS1P23219 599 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 SMARCA1P28370 1054 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 CCND2P30279 289 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 ECI1P42126 302 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 RGS19P49795 217 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 AK2P54819 239 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 NLRP5P59047 1200 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 PPP2R2AP63151 447 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 LAPTM5Q13571 262 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 TOB2Q14106 344 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-238ENST00000556288 HSP90AA2PQ14568 343 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-238ENST00000556288 ANKRD1Q15327 319 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 SF1Q15637 639 aaKnown RBP5.3□□□□□ -1.56
ATXN3-238ENST00000556288 KCNA10Q16322 511 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 UBE2SQ16763 222 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 LY6KQ17RY6 165 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 SLC35G1Q2M3R5 365 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 TMEM63BQ5T3F8 832 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 MAP3K21Q5TCX8 1036 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 JAKMIP3Q5VZ66 844 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 MAMDC4Q6UXC1 1216 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 TMTC3Q6ZXV5 915 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 SPATC1Q76KD6 591 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 SLCO6A1Q86UG4 719 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 NLRX1Q86UT6 975 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 SGMS1Q86VZ5 419 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 MSL3Q8N5Y2 521 aaKnown RBP5.3□□□□□ -1.56
ATXN3-238ENST00000556288 DNERQ8NFT8 737 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 OR6J1Q8NGC5 347 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 COPS5Q92905 334 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 SGSM3Q96HU1 749 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 DEPDC7Q96QD5 511 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 PLCD4Q9BRC7 762 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 SPZ1Q9BXG8 430 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 TM6SF1Q9BZW5 370 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 CLEC1BQ9P126 229 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 COL20A1Q9P218 1284 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 IMPACTQ9P2X3 320 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 ATP11BQ9Y2G3 1177 aa5.3□□□□□ -1.56
ATXN3-238ENST00000556288 NR2E3Q9Y5X4 410 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms