RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 DNAJA1P31689 397 aaKnown RBP7.43□□□□□ -1.22
SLIRP-204ENST00000555890 YWHABP31946 246 aaKnown RBP7.43□□□□□ -1.22
SLIRP-204ENST00000555890 KRT9P35527 623 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 CDK7P50613 346 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 ALDH5A1P51649 535 aaPredicted RBP7.43□□□□□ -1.22
SLIRP-204ENST00000555890 ZNF131P52739 623 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 TERF1P54274 439 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 ARID5AQ03989 594 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 PPP2R3AQ06190 1150 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 ORC1Q13415 861 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 SYCP1Q15431 976 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 PTPN21Q16825 1174 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 XKR9Q5GH70 373 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 ODR4Q5SWX8 454 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 SH3PXD2AQ5TCZ1 1133 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 OLFML2BQ68BL8 750 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 KCNV1Q6PIU1 500 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 ZC3H14Q6PJT7 736 aaKnown RBP7.43□□□□□ -1.22
SLIRP-204ENST00000555890 LRRC55Q6ZSA7 311 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 TREML1Q86YW5 311 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 TMTC1Q8IUR5 882 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 ZNF295-AS1Q8N0V1 137 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 SHCBP1Q8NEM2 672 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 OR8K1Q8NGG5 319 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 GOLGA5Q8TBA6 731 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 ERGIC2Q96RQ1 377 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 PHACTR1Q9C0D0 580 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 NDST4Q9H3R1 872 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 METTL14Q9HCE5 456 aaKnown RBP7.43□□□□□ -1.22
SLIRP-204ENST00000555890 JPH1Q9HDC5 661 aaPredicted RBP7.43□□□□□ -1.22
SLIRP-204ENST00000555890 ZNHIT6Q9NWK9 470 aaKnown RBP7.43□□□□□ -1.22
SLIRP-204ENST00000555890 NCDNQ9UBB6 729 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 SLC9A2Q9UBY0 812 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 KCNG1Q9UIX4 513 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 CAPN11Q9UMQ6 739 aa7.43□□□□□ -1.22
SLIRP-204ENST00000555890 R3HCC1Q9Y3T6 440 aaKnown RBP7.43□□□□□ -1.22
SLIRP-204ENST00000555890 LOC102724159A0A0B4J2E5 919 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 A0A1W2PQ45 241 aaPredicted RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 A0A1W2PQJ5 194 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 A0A1W2PQY0 241 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 GIPC1O14908 333 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 SIAH2O43255 324 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 CPNE3O75131 537 aaKnown RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 HIP1RO75146 1068 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 DGAT1O75907 488 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 PRPF6O94906 941 aaKnown RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 CCNE2O96020 404 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 GYPCP04921 128 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 ADH1AP07327 375 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 MYBP10242 640 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 TGFB3P10600 412 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 ATP2A2P16615 1042 aaKnown RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 TRIM21P19474 475 aaKnown RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 NR2F2P24468 414 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 RARRES1P49788 294 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 CCNA1P78396 465 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 CNTN2Q02246 1040 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 CENPCQ03188 943 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 TAP1Q03518 808 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 GOLGA8FQ08AF8 430 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 GOLGA8DPQ0D2H9 430 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 NEDD9Q14511 834 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 PWP2Q15269 919 aaKnown RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 NFIL3Q16649 462 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 FIGNQ5HY92 759 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 MIIPQ5JXC2 388 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 CEP135Q66GS9 1140 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 E4F1Q66K89 784 aaPredicted RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 CCSAPQ6IQ19 270 aaPredicted RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 CYP26C1Q6V0L0 522 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 EP400NLQ6ZTU2 488 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 HS2ST1Q7LGA3 356 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 ZNF720Q7Z2F6 126 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 TMEM139Q8IV31 216 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 ZC3H3Q8IXZ2 948 aaKnown RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 SYCP3Q8IZU3 236 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 FAM133AQ8N9E0 248 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 GPR152Q8TDT2 470 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 EEF2KMTQ96G04 330 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 C16orf45Q96MC5 204 aaPredicted RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 MMP19Q99542 508 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 FGFBP2Q9BYJ0 223 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 EDEM3Q9BZQ6 932 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 TMEM206Q9H813 350 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 IL23AQ9NPF7 189 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 TRMT1Q9NXH9 659 aaKnown RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 CGNQ9P2M7 1197 aaKnown RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 WRAP73Q9P2S5 460 aaPredicted RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 GABBR1Q9UBS5 961 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 TMA7Q9Y2S6 64 aaKnown RBP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 PAXBP1Q9Y5B6 917 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.42□□□□□ -1.22
SLIRP-204ENST00000555890 ARID2Q68CP9 1835 aa7.42□□□□□ -1.22
SLIRP-204ENST00000555890 TTC26A0AVF1 554 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 SLC16A3O15427 465 aaKnown RBP7.41□□□□□ -1.22
SLIRP-204ENST00000555890 USO1O60763 962 aaKnown RBP7.41□□□□□ -1.22
SLIRP-204ENST00000555890 ADAMTS4O75173 837 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 ARHGEF15O94989 841 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 PGK1P00558 417 aa7.41□□□□□ -1.22
SLIRP-204ENST00000555890 NR3C1P04150 777 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms