RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 HYAL3O43820 417 aaPredicted RBP15.24■□□□□ 0.03
PRPF39-204ENST00000553605 SLC37A4O43826 429 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 ATG13O75143 517 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 BRCC3P46736 316 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 TWF1Q12792 350 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 CTTNQ14247 550 aaKnown RBP15.24■□□□□ 0.03
PRPF39-204ENST00000553605 UPP1Q16831 310 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 TPGS2Q68CL5 300 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 GPIHBP1Q8IV16 184 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 CAMKK1Q8N5S9 505 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 DYDC2Q96IM9 177 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 ZFYVE19Q96K21 471 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 PRIMPOLQ96LW4 560 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 FAM20AQ96MK3 541 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 RNF26Q9BY78 433 aaPredicted RBP15.24■□□□□ 0.03
PRPF39-204ENST00000553605 TMEM9BQ9NQ34 198 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 SH3GLB2Q9NR46 395 aa15.24■□□□□ 0.03
PRPF39-204ENST00000553605 N4BP3O15049 544 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 DGAT1O75907 488 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 PRKCBP05771 671 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 FGD1P98174 961 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 CYP4A11Q02928 519 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 ARHGAP29Q52LW3 1261 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 PPP4R3CPQ6ZMV5 832 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 HAUS6Q7Z4H7 955 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 NOSTRINQ8IVI9 506 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 C3orf58Q8NDZ4 430 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 DEFB124Q8NES8 71 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 SHKBP1Q8TBC3 707 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 UROC1Q96N76 676 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 PDZD7Q9H5P4 517 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 KCNMB3Q9NPA1 279 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 ANO2Q9NQ90 1003 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 PRMT7Q9NVM4 692 aaPredicted RBP15.23■□□□□ 0.03
PRPF39-204ENST00000553605 PCDHA4Q9UN74 947 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 LAMA5O15230 3695 aa15.23■□□□□ 0.03
PRPF39-204ENST00000553605 SMG1Q96Q15 3661 aaKnown RBP15.22■□□□□ 0.03
PRPF39-204ENST00000553605 ADAMTS20P59510 1910 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 H7C4K7 107 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 CDX4O14627 284 aaPredicted RBP15.22■□□□□ 0.03
PRPF39-204ENST00000553605 KHNYNO15037 678 aaKnown RBP15.22■□□□□ 0.03
PRPF39-204ENST00000553605 TMEM132AQ24JP5 1023 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 ADCK5Q3MIX3 580 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 GLRA4Q5JXX5 417 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 C19orf48Q6RUI8 117 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 ARID3BQ8IVW6 561 aaPredicted RBP15.22■□□□□ 0.03
PRPF39-204ENST00000553605 TPH2Q8IWU9 490 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 LRRC3BQ96PB8 259 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 PPP1R10Q96QC0 940 aaKnown RBP15.22■□□□□ 0.03
PRPF39-204ENST00000553605 TMEM209Q96SK2 561 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 ESYT1Q9BSJ8 1104 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 FZD8Q9H461 694 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 FBXL5Q9UKA1 691 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 KLK13Q9UKR3 277 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 GDAQ9Y2T3 454 aa15.22■□□□□ 0.03
PRPF39-204ENST00000553605 FLNBO75369 2602 aaKnown RBP15.21■□□□□ 0.03
PRPF39-204ENST00000553605 A0A1W2PRU2 124 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 LRRIQ4A6NIV6 560 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 TTLL13PA6NNM8 815 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 M0R2N6 131 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 DPYSL4O14531 572 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 DCLK1O15075 740 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 SLITRK3O94933 977 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 KARSQ15046 597 aaKnown RBP15.21■□□□□ 0.03
PRPF39-204ENST00000553605 NTRK3Q16288 839 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 FAM187BQ17R55 369 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 UAP1L1Q3KQV9 507 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 NCAPH2Q6IBW4 605 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 PDZD3Q86UT5 571 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 PROSER1Q86XN7 944 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 BLIDQ8IZY5 108 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 ADPGKQ9BRR6 497 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 POLR3FQ9H1D9 316 aaPredicted RBP15.21■□□□□ 0.03
PRPF39-204ENST00000553605 GOLGA2P5Q9HBQ8 144 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 MAFFQ9ULX9 164 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 GPSM3Q9Y4H4 160 aa15.21■□□□□ 0.03
PRPF39-204ENST00000553605 FREM2Q5SZK8 3169 aa15.2■□□□□ 0.02
PRPF39-204ENST00000553605 EML5Q05BV3 1969 aa15.2■□□□□ 0.02
PRPF39-204ENST00000553605 ARID2Q68CP9 1835 aa15.2■□□□□ 0.02
PRPF39-204ENST00000553605 SYN3O14994 580 aa15.2■□□□□ 0.02
PRPF39-204ENST00000553605 MARCH6O60337 910 aa15.2■□□□□ 0.02
PRPF39-204ENST00000553605 TNK2Q07912 1038 aa15.2■□□□□ 0.02
PRPF39-204ENST00000553605 GRSF1Q12849 480 aaKnown RBP eCLIP15.2■□□□□ 0.02
PRPF39-204ENST00000553605 PRPF4BQ13523 1007 aaKnown RBP15.2■□□□□ 0.02
PRPF39-204ENST00000553605 MRPL58Q14197 206 aaKnown RBP15.2■□□□□ 0.02
PRPF39-204ENST00000553605 INF2Q27J81 1249 aa15.2■□□□□ 0.02
PRPF39-204ENST00000553605 HHIPQ96QV1 700 aa15.2■□□□□ 0.02
PRPF39-204ENST00000553605 SLC32A1Q9H598 525 aa15.2■□□□□ 0.02
PRPF39-204ENST00000553605 ANKEF1Q9NU02 776 aa15.2■□□□□ 0.02
PRPF39-204ENST00000553605 POLR3BQ9NW08 1133 aaPredicted RBP15.2■□□□□ 0.02
PRPF39-204ENST00000553605 ANKFY1Q9P2R3 1169 aa15.2■□□□□ 0.02
PRPF39-204ENST00000553605 AFF4Q9UHB7 1163 aaKnown RBP15.2■□□□□ 0.02
PRPF39-204ENST00000553605 IFNAR1P17181 557 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 GBP1P32455 592 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 PLCB2Q00722 1185 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 PTPAQ15257 358 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 ITPRIPL2Q3MIP1 535 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 TSGA10IPQ3SY00 556 aa15.19■□□□□ 0.02
PRPF39-204ENST00000553605 CTXN3Q4LDR2 81 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms