RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 RPL17P18621 184 aaKnown RBP16.63■□□□□ 0.25
SHMT2-204ENST00000553324 TKTP29401 623 aaKnown RBP16.63■□□□□ 0.25
SHMT2-204ENST00000553324 NDUFA8P51970 172 aa16.63■□□□□ 0.25
SHMT2-204ENST00000553324 EHHADHQ08426 723 aa16.63■□□□□ 0.25
SHMT2-204ENST00000553324 UVSSAQ2YD98 709 aa16.63■□□□□ 0.25
SHMT2-204ENST00000553324 KANK3Q6NY19 840 aa16.63■□□□□ 0.25
SHMT2-204ENST00000553324 CRELD2Q6UXH1 353 aaPredicted RBP16.63■□□□□ 0.25
SHMT2-204ENST00000553324 EPM2AIP1Q7L775 607 aaPredicted RBP16.63■□□□□ 0.25
SHMT2-204ENST00000553324 KREMEN2Q8NCW0 462 aa16.63■□□□□ 0.25
SHMT2-204ENST00000553324 CACTINQ8WUQ7 758 aaKnown RBP16.63■□□□□ 0.25
SHMT2-204ENST00000553324 CCDC47Q96A33 483 aaKnown RBP16.63■□□□□ 0.25
SHMT2-204ENST00000553324 RPGRIP1Q96KN7 1286 aa16.63■□□□□ 0.25
SHMT2-204ENST00000553324 C1QTNF1Q9BXJ1 281 aa16.63■□□□□ 0.25
SHMT2-204ENST00000553324 FGFBP2Q9BYJ0 223 aa16.63■□□□□ 0.25
SHMT2-204ENST00000553324 PCDHB8Q9UN66 801 aa16.63■□□□□ 0.25
SHMT2-204ENST00000553324 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.62■□□□□ 0.25
SHMT2-204ENST00000553324 ZNF233A6NK53 670 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 PAPLNO95428 1278 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 IGFBP6P24592 240 aaPredicted RBP16.62■□□□□ 0.25
SHMT2-204ENST00000553324 OR1D2P34982 312 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 MRPL58Q14197 206 aaKnown RBP16.62■□□□□ 0.25
SHMT2-204ENST00000553324 SURF1Q15526 300 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 VARS2Q5ST30 1063 aaKnown RBP16.62■□□□□ 0.25
SHMT2-204ENST00000553324 LIN9Q5TKA1 542 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 HS2ST1Q7LGA3 356 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 GLYCTKQ8IVS8 523 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 GPD1LQ8N335 351 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 PLCD3Q8N3E9 789 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 FSIP1Q8NA03 581 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 GOLGA5Q8TBA6 731 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 HPS3Q969F9 1004 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 CHAMP1Q96JM3 812 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 CBWD1Q9BRT8 395 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 IKZF4Q9H2S9 585 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 EXOC1Q9NV70 894 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 RBAKQ9NYW8 714 aaPredicted RBP16.62■□□□□ 0.25
SHMT2-204ENST00000553324 USTQ9Y2C2 406 aa16.62■□□□□ 0.25
SHMT2-204ENST00000553324 C5orf42Q9H799 3197 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 I3L4J1 428 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 M0QZQ0 153 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 PIRO00625 290 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 ZMYND10O75800 440 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 ZNF202O95125 648 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 KIF20AO95235 890 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 NFICP08651 508 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 HNRNPA1P09651 372 aaKnown RBP eCLIP16.61■□□□□ 0.25
SHMT2-204ENST00000553324 SPATA31D3P0C874 917 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 AARSP49588 968 aaKnown RBP eCLIP16.61■□□□□ 0.25
SHMT2-204ENST00000553324 LILRA4P59901 499 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 BMT2Q1RMZ1 405 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 C9orf57Q5W0N0 161 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 SLC8B1Q6J4K2 584 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 DSTYKQ6XUX3 929 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 SPATA31D4Q6ZUB0 917 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 CCDC149Q6ZUS6 474 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 USP37Q86T82 979 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 BRSK2Q8IWQ3 736 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 SCFD1Q8WVM8 642 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 SAAL1Q96ER3 474 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 PCIF1Q9H4Z3 704 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 POMKQ9H5K3 350 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 PIDD1Q9HB75 910 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 SLC39A2Q9NP94 309 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 DPP3Q9NY33 737 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 FBXW11Q9UKB1 542 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 CIZ1Q9ULV3 898 aaPredicted RBP16.61■□□□□ 0.25
SHMT2-204ENST00000553324 MAFFQ9ULX9 164 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 CDY1Q9Y6F8 540 aa16.61■□□□□ 0.25
SHMT2-204ENST00000553324 ANO9A1A5B4 782 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 DCXO43602 365 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 OAZ2O95190 189 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 CASP1P29466 404 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 HOXA9P31269 272 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 ELF1P32519 619 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 HOXD13P35453 343 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 YWHAHQ04917 246 aaPredicted RBP16.6■□□□□ 0.25
SHMT2-204ENST00000553324 KNOP1Q1ED39 458 aaKnown RBP16.6■□□□□ 0.25
SHMT2-204ENST00000553324 ZNF280DQ6N043 979 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 RNF135Q8IUD6 432 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 GRAMD1CQ8IYS0 662 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 GLIS3Q8NEA6 775 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 ZNF461Q8TAF7 563 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 ACSF2Q96CM8 615 aaPredicted RBP16.6■□□□□ 0.25
SHMT2-204ENST00000553324 PRKD2Q9BZL6 878 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 GDPD2Q9HCC8 539 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 DSEQ9UL01 958 aa16.6■□□□□ 0.25
SHMT2-204ENST00000553324 TULP1O00294 542 aaPredicted RBP16.59■□□□□ 0.25
SHMT2-204ENST00000553324 KLRC4O43908 158 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 TBC1D4O60343 1298 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 RFPL2O75678 378 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 TYMPP19971 482 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 PNPLA4P41247 253 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 KMT5BQ4FZB7 885 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 CTXN3Q4LDR2 81 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 PPM1LQ5SGD2 360 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 TPGS2Q68CL5 300 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 KRBA2Q6ZNG9 492 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 OTOP3Q7RTS5 596 aa16.59■□□□□ 0.25
SHMT2-204ENST00000553324 NOC3LQ8WTT2 800 aaKnown RBP16.59■□□□□ 0.25
SHMT2-204ENST00000553324 SMG7Q92540 1137 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms