RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 SHROOM1Q2M3G4 852 aaPredicted RBP24.51■■□□□ 1.51
NPAS3-206ENST00000548645 FYB2Q5VWT5 728 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 NLRP9Q7RTR0 991 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 AMIGO3Q86WK7 504 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 MFN1Q8IWA4 741 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 DDX1Q92499 740 aaKnown RBP24.51■■□□□ 1.51
NPAS3-206ENST00000548645 AVENQ9NQS1 362 aaPredicted RBP24.51■■□□□ 1.51
NPAS3-206ENST00000548645 GRID1Q9ULK0 1009 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 GNAT1P11488 350 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 RPA3P35244 121 aaPredicted RBP24.51■■□□□ 1.51
NPAS3-206ENST00000548645 PKN2Q16513 984 aaKnown RBP24.51■■□□□ 1.51
NPAS3-206ENST00000548645 IRGCQ6NXR0 463 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 PADI6Q6TGC4 694 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 GSTA5Q7RTV2 222 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 ANKS1BQ7Z6G8 1248 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 SIAH1Q8IUQ4 282 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 ATRNL1Q5VV63 1379 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 MROH7Q68CQ1 1323 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 ECE2O60344 883 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 GRIN3BO60391 1043 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 BBOX1O75936 387 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 VHLP40337 213 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 TUBP50607 506 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 NFIAQ12857 509 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 P3H1Q32P28 736 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 GMCL1P1Q8NEA9 526 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 ZNF398Q8TD17 642 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 SEMA4DQ92854 862 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 UNC45AQ9H3U1 944 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 ASB3Q9Y575 518 aa24.51■■□□□ 1.51
NPAS3-206ENST00000548645 NDUFB10O96000 172 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 HSPA1LP34931 641 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 SCNN1DP51172 638 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 CCDC6Q16204 474 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 CWF19L1Q69YN2 538 aaKnown RBP24.5■■□□□ 1.51
NPAS3-206ENST00000548645 C4orf33Q8N1A6 199 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 CERS5Q8N5B7 392 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 FAM196BA6NMK8 535 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 BMP3P12645 472 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 KLRC2P26717 231 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 ROR2Q01974 943 aaKnown RBP24.5■■□□□ 1.51
NPAS3-206ENST00000548645 CRY2Q49AN0 593 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 KRT39Q6A163 491 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 PRR5LQ6MZQ0 368 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 C4orf50Q6ZRC1 276 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 OTOAQ7RTW8 1153 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 HELQQ8TDG4 1101 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 ZNF333Q96JL9 665 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 NT5C1BQ96P26 610 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 CYLDQ9NQC7 956 aa24.5■■□□□ 1.51
NPAS3-206ENST00000548645 DYNC1LI1Q9Y6G9 523 aaKnown RBP24.5■■□□□ 1.51
NPAS3-206ENST00000548645 ZSWIM2Q8NEG5 633 aa24.49■■□□□ 1.51
NPAS3-206ENST00000548645 ZNF577Q9BSK1 485 aa24.49■■□□□ 1.51
NPAS3-206ENST00000548645 ETAA1Q9NY74 926 aa24.49■■□□□ 1.51
NPAS3-206ENST00000548645 SLC1A5Q15758 541 aa24.49■■□□□ 1.51
NPAS3-206ENST00000548645 FAM182BQ5T319 152 aa24.49■■□□□ 1.51
NPAS3-206ENST00000548645 PCNX4Q63HM2 1172 aa24.49■■□□□ 1.51
NPAS3-206ENST00000548645 MCOLN2Q8IZK6 566 aa24.49■■□□□ 1.51
NPAS3-206ENST00000548645 NMRK1Q9NWW6 199 aa24.49■■□□□ 1.51
NPAS3-206ENST00000548645 LRCH1Q9Y2L9 728 aa24.49■■□□□ 1.51
NPAS3-206ENST00000548645 CFBP00751 764 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 MYBL1P10243 752 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 SP100P23497 879 aaPredicted RBP24.48■■□□□ 1.51
NPAS3-206ENST00000548645 SNRPFP62306 86 aaKnown RBP24.48■■□□□ 1.51
NPAS3-206ENST00000548645 EGFL6Q8IUX8 553 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 ZFPM1Q8IX07 1006 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 ZNF75CPQ92670 426 aaPredicted RBP24.48■■□□□ 1.51
NPAS3-206ENST00000548645 TRIM11Q96F44 468 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 FAM118BQ9BPY3 351 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 OSBPL8Q9BZF1 889 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 COA1Q9GZY4 146 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 PPCSQ9HAB8 311 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 TROVE2P10155 538 aaKnown RBP eCLIP24.48■■□□□ 1.51
NPAS3-206ENST00000548645 GPC3P51654 580 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 CEP55Q53EZ4 464 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 CLNKQ7Z7G1 428 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 MTDHQ86UE4 582 aaKnown RBP24.48■■□□□ 1.51
NPAS3-206ENST00000548645 FAM136AQ96C01 138 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 TEKT3Q9BXF9 490 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 DLGAP2Q9P1A6 1054 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 CCDC22O60826 627 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 ZWINTO95229 277 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 ADSSP30520 456 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 KHDC1Q4VXA5 237 aaKnown RBP24.48■■□□□ 1.51
NPAS3-206ENST00000548645 HHIPL2Q6UWX4 724 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 TMEM179Q6ZVK1 233 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 TEKT1Q969V4 418 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 TUBB6Q9BUF5 446 aa24.48■■□□□ 1.51
NPAS3-206ENST00000548645 RIMBP2O15034 1052 aa24.47■■□□□ 1.51
NPAS3-206ENST00000548645 PSTPIP1O43586 416 aa24.47■■□□□ 1.51
NPAS3-206ENST00000548645 ADRB2P07550 413 aa24.47■■□□□ 1.51
NPAS3-206ENST00000548645 SKIP12755 728 aa24.47■■□□□ 1.51
NPAS3-206ENST00000548645 TRAF1Q13077 416 aa24.47■■□□□ 1.51
NPAS3-206ENST00000548645 ZRSR2Q15696 482 aaKnown RBP24.47■■□□□ 1.51
NPAS3-206ENST00000548645 APOBEC3HQ6NTF7 200 aaKnown RBP24.47■■□□□ 1.51
NPAS3-206ENST00000548645 RHOT1Q8IXI2 618 aa24.47■■□□□ 1.51
NPAS3-206ENST00000548645 NPHS2Q9NP85 383 aa24.47■■□□□ 1.51
NPAS3-206ENST00000548645 COQ4Q9Y3A0 265 aa24.47■■□□□ 1.51
NPAS3-206ENST00000548645 TYROBPO43914 113 aa24.47■■□□□ 1.51
NPAS3-206ENST00000548645 PROSCO94903 275 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms