RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 SFR1Q86XK3 245 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 LINC00301Q8NCQ3 95 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 SLC7A14Q8TBB6 771 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 RSAD2Q8WXG1 361 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 DDX12PQ92771 950 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 STAMQ92783 540 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 SUSD3Q96L08 255 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 PIDD1Q9HB75 910 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 CPSF3Q9UKF6 684 aaKnown RBP11.23□□□□□ -0.61
BEST3-208ENST00000547208 DUSP12Q9UNI6 340 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 STYXL1Q9Y6J8 313 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 COL4A2P08572 1712 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 OBSL1O75147 1896 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 MIA3Q5JRA6 1907 aa11.23□□□□□ -0.61
BEST3-208ENST00000547208 FRMD3A2A2Y4 597 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 ANHXE9PGG2 379 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 M0QZQ0 153 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 CCL16O15467 120 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 NARSO43776 548 aaKnown RBP11.22□□□□□ -0.61
BEST3-208ENST00000547208 LAMP2P13473 410 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 CYP3A5P20815 502 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 AVPR2P30518 371 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 ADSSP30520 456 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 GBP2P32456 591 aaPredicted RBP11.22□□□□□ -0.61
BEST3-208ENST00000547208 MATR3P43243 847 aaKnown RBP eCLIP11.22□□□□□ -0.61
BEST3-208ENST00000547208 GUCY2FP51841 1108 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 COL4A3Q01955 1670 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 PPP2R3AQ06190 1150 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 KCNA1Q09470 495 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 KYAT1Q16773 422 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 UVSSAQ2YD98 709 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 PPM1LQ5SGD2 360 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 GET4Q7L5D6 327 aaPredicted RBP11.22□□□□□ -0.61
BEST3-208ENST00000547208 GRASPQ7Z6J2 395 aaPredicted RBP11.22□□□□□ -0.61
BEST3-208ENST00000547208 SUGP1Q8IWZ8 645 aaKnown RBP11.22□□□□□ -0.61
BEST3-208ENST00000547208 KRI1Q8N9T8 703 aaKnown RBP11.22□□□□□ -0.61
BEST3-208ENST00000547208 ZNF461Q8TAF7 563 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 KIF12Q96FN5 646 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 MSTO1Q9BUK6 570 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 HCFC1R1Q9NWW0 138 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.22□□□□□ -0.61
BEST3-208ENST00000547208 IGSF9Q9P2J2 1179 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 FBXL5Q9UKA1 691 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 NUB1Q9Y5A7 615 aa11.22□□□□□ -0.61
BEST3-208ENST00000547208 NUP210Q8TEM1 1887 aaPredicted RBP11.21□□□□□ -0.61
BEST3-208ENST00000547208 ARHGEF37A1IGU5 675 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 PPEF2O14830 753 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 FSHRP23945 695 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 ABCD1P33897 745 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 MCM4P33991 863 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 TXLNAP40222 546 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 CASP5P51878 434 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 HTR4Q13639 388 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 E2F4Q16254 413 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 SPATA1Q5VX52 437 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 CRELD2Q6UXH1 353 aaPredicted RBP11.21□□□□□ -0.61
BEST3-208ENST00000547208 CCDC73Q6ZRK6 1079 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 SV2BQ7L1I2 683 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 RTL10Q7L3V2 364 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 SLC44A3Q8N4M1 653 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 ITFG1Q8TB96 612 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 HVCN1Q96D96 273 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 PHF12Q96QT6 1004 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 TSPAN18Q96SJ8 248 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 FGFBP2Q9BYJ0 223 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 PANK2Q9BZ23 570 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 RPF1Q9H9Y2 349 aaKnown RBP11.21□□□□□ -0.61
BEST3-208ENST00000547208 OLFML3Q9NRN5 406 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 TFIP11Q9UBB9 837 aaKnown RBP11.21□□□□□ -0.61
BEST3-208ENST00000547208 DNMT3BQ9UBC3 853 aaKnown RBP11.21□□□□□ -0.61
BEST3-208ENST00000547208 SEL1LQ9UBV2 794 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 UBQLN1Q9UMX0 589 aaKnown RBP11.21□□□□□ -0.61
BEST3-208ENST00000547208 PCDHB8Q9UN66 801 aa11.21□□□□□ -0.61
BEST3-208ENST00000547208 PATJQ8NI35 1801 aa11.21□□□□□ -0.62
BEST3-208ENST00000547208 VPS13AQ96RL7 3174 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 H0Y858 1186 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 H7C4K7 107 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 SPTLC2O15270 562 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 PPP6R2O75170 966 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 XYLBO75191 536 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 OAZ2O95190 189 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 SEC24AO95486 1093 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 VNN2O95498 520 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 NFICP08651 508 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 ATF2P15336 505 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 NPR3P17342 541 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 STAT6P42226 847 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 ACOT2P49753 483 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 PKP1Q13835 747 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 CWF19L1Q69YN2 538 aaKnown RBP11.2□□□□□ -0.62
BEST3-208ENST00000547208 JADE1Q6IE81 842 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 ASCL5Q7RTU5 278 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 TMEM105Q8N8V8 129 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 NXPE3Q969Y0 559 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 RPP25Q9BUL9 199 aaKnown RBP11.2□□□□□ -0.62
BEST3-208ENST00000547208 TBC1D7Q9P0N9 293 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 CDH7Q9ULB5 785 aa11.2□□□□□ -0.62
BEST3-208ENST00000547208 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.2□□□□□ -0.62
BEST3-208ENST00000547208 FAM186AA6NE01 2351 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms