RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 PXNP49023 591 aaPredicted RBP8.04□□□□□ -1.12
COPA-207ENST00000545284 SIM1P81133 766 aaPredicted RBP8.04□□□□□ -1.12
COPA-207ENST00000545284 EXOSC10Q01780 885 aaKnown RBP8.04□□□□□ -1.12
COPA-207ENST00000545284 AKAP17AQ02040 695 aaKnown RBP8.04□□□□□ -1.12
COPA-207ENST00000545284 SEMA3BQ13214 749 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 EPHA7Q15375 998 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 TEAD2Q15562 447 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 RNF20Q5VTR2 975 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 PMS2CLQ68D20 193 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 APBB1IPQ7Z5R6 666 aaPredicted RBP8.04□□□□□ -1.12
COPA-207ENST00000545284 RAB44Q7Z6P3 723 aaPredicted RBP8.04□□□□□ -1.12
COPA-207ENST00000545284 RAB11FIP4Q86YS3 637 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 ARID3BQ8IVW6 561 aaPredicted RBP8.04□□□□□ -1.12
COPA-207ENST00000545284 ZNF579Q8NAF0 562 aaKnown RBP8.04□□□□□ -1.12
COPA-207ENST00000545284 LSM14AQ8ND56 463 aaKnown RBP8.04□□□□□ -1.12
COPA-207ENST00000545284 DEFB124Q8NES8 71 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 TBCKQ8TEA7 893 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 ACDQ96AP0 544 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 NUSAP1Q9BXS6 441 aaKnown RBP8.04□□□□□ -1.12
COPA-207ENST00000545284 FZD8Q9H461 694 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 SLITRK6Q9H5Y7 841 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 GTSE1Q9NYZ3 720 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 CEP72Q9P209 647 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 DKK4Q9UBT3 224 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 ASB3Q9Y575 518 aa8.04□□□□□ -1.12
COPA-207ENST00000545284 CAPN8A6NHC0 703 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 EML1O00423 815 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 SLC27A2O14975 620 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 RECQL4O94761 1208 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 LYPLA2O95372 231 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 HMGB1P09429 215 aaKnown RBP8.03□□□□□ -1.12
COPA-207ENST00000545284 MYL4P12829 197 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 TKTP29401 623 aaKnown RBP8.03□□□□□ -1.12
COPA-207ENST00000545284 CDC27P30260 824 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 RPL9P32969 192 aaKnown RBP8.03□□□□□ -1.12
COPA-207ENST00000545284 ADD1P35611 737 aaKnown RBP8.03□□□□□ -1.12
COPA-207ENST00000545284 SOX9P48436 509 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 CLCNKBP51801 687 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 IRX4P78413 519 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 NECTIN1Q15223 517 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 COL28A1Q2UY09 1125 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 XKR9Q5GH70 373 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 TTC22Q5TAA0 569 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 PPP4R3AQ6IN85 833 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 GALNT17Q6IS24 598 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 SLC23A3Q6PIS1 610 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 CD300LGQ6UXG3 332 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 DHX32Q7L7V1 743 aaKnown RBP8.03□□□□□ -1.12
COPA-207ENST00000545284 BEST2Q8NFU1 509 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 SHKBP1Q8TBC3 707 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 ADAM32Q8TC27 787 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 BPIFB1Q8TDL5 484 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 PPP1R10Q96QC0 940 aaKnown RBP8.03□□□□□ -1.12
COPA-207ENST00000545284 LXNQ9BS40 222 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 MKNK1Q9BUB5 465 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 RNF26Q9BY78 433 aaPredicted RBP8.03□□□□□ -1.12
COPA-207ENST00000545284 LRRC2Q9BYS8 371 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 CCDC86Q9H6F5 360 aaKnown RBP8.03□□□□□ -1.12
COPA-207ENST00000545284 KCNMB3Q9NPA1 279 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 XPNPEP1Q9NQW7 623 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 IGSF5Q9NSI5 407 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 ANKEF1Q9NU02 776 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 SLC38A7Q9NVC3 462 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 CACNG4Q9UBN1 327 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 BRPF3Q9ULD4 1205 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 NOTCH4Q99466 2003 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 COL4A2P08572 1712 aa8.03□□□□□ -1.12
COPA-207ENST00000545284 TNFRSF10BO14763 440 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 MEFVO15553 781 aaPredicted RBP8.02□□□□□ -1.13
COPA-207ENST00000545284 B4GALT5O43286 388 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 SEC24AO95486 1093 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 SEC24BO95487 1268 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 XRCC6P12956 609 aaKnown RBP eCLIP8.02□□□□□ -1.13
COPA-207ENST00000545284 GSPT1P15170 499 aaKnown RBP8.02□□□□□ -1.13
COPA-207ENST00000545284 GBP1P32455 592 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 MCM2P49736 904 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 EPHB3P54753 998 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 SCAPQ12770 1279 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 TWF1Q12792 350 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 CAPSQ13938 189 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 UAP1L1Q3KQV9 507 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 TSGA10IPQ3SY00 556 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 ARHGAP15Q53QZ3 475 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 CREB3L3Q68CJ9 461 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 CDCA2Q69YH5 1023 aaPredicted RBP8.02□□□□□ -1.13
COPA-207ENST00000545284 ZNF280DQ6N043 979 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 KIAA1211LQ6NV74 962 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 C19orf48Q6RUI8 117 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 CYP2U1Q7Z449 544 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 RABEPKQ7Z6M1 372 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 SYT12Q8IV01 421 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 HS6ST3Q8IZP7 471 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 APPL2Q8NEU8 664 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 CEP76Q8TAP6 659 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 GJA10Q969M2 543 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 RSPRY1Q96DX4 576 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 UBL7Q96S82 380 aaPredicted RBP8.02□□□□□ -1.13
COPA-207ENST00000545284 NAP1L4Q99733 375 aaKnown RBP8.02□□□□□ -1.13
COPA-207ENST00000545284 FAM83CQ9BQN1 747 aa8.02□□□□□ -1.13
COPA-207ENST00000545284 LRRC3Q9BY71 257 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms