RNA–Protein interactions for RNA: ENST00000544382.5

CLPB-213, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, human

TSL 5

Gene CLPB, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLPB-213	ENST00000544382	SPATA31D4	Q6ZUB0	917 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	NT5DC4	Q86YG4	428 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	PLCD3	Q8N3E9	789 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	SMG7	Q92540	1137 aa	Known RBP	13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	ACSF2	Q96CM8	615 aa	Predicted RBP	13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	CCDC34	Q96HJ3	373 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	FAM213A	Q9BRX8	229 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	FBXW11	Q9UKB1	542 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	PCDHB8	Q9UN66	801 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	UST	Q9Y2C2	406 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	CDY1	Q9Y6F8	540 aa		13.71	□□□□□ -0.21
CLPB-213	ENST00000544382	DENND4A	Q7Z401	1863 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	PVALEF	A0A1B0GWK0	134 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	TULP1	O00294	542 aa	Predicted RBP	13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	EXTL3	O43909	919 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	XYLB	O75191	536 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	PRPF6	O94906	941 aa	Known RBP	13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	MYL1	P05976	194 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	NFIC	P08651	508 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	PFKFB1	P16118	471 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	SP100	P23497	879 aa	Predicted RBP	13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	ADSS	P30520	456 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	SYK	P43405	635 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	AFM	P43652	599 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	KCNA1	Q09470	495 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	TMEM31	Q5JXX7	168 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	PPM1L	Q5SGD2	360 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	ZNF280D	Q6N043	979 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	KANK3	Q6NY19	840 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	CD300LG	Q6UXG3	332 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	DSTYK	Q6XUX3	929 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	RTL10	Q7L3V2	364 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	OTOP3	Q7RTS5	596 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	USP37	Q86T82	979 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	NOC3L	Q8WTT2	800 aa	Known RBP	13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	EPHX3	Q9H6B9	360 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	RBAK	Q9NYW8	714 aa	Predicted RBP	13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	SERTAD1	Q9UHV2	236 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	MUTYH	Q9UIF7	546 aa		13.7	□□□□□ -0.22
CLPB-213	ENST00000544382	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.69	□□□□□ -0.22
CLPB-213	ENST00000544382		A0A1B0GVL5	298 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	ZMYND10	O75800	440 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	C8A	P07357	584 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	HOXA9	P31269	272 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	ELF1	P32519	619 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	SNRPF	P62306	86 aa	Known RBP	13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	YWHAH	Q04917	246 aa	Predicted RBP	13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	UVSSA	Q2YD98	709 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	CTXN3	Q4LDR2	81 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	HS2ST1	Q7LGA3	356 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	BRSK2	Q8IWQ3	736 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	CACTIN	Q8WUQ7	758 aa	Known RBP	13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	CCDC47	Q96A33	483 aa	Known RBP	13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	SAAL1	Q96ER3	474 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	FGFBP2	Q9BYJ0	223 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	PRKD2	Q9BZL6	878 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	BLZF1	Q9H2G9	400 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	KIAA1586	Q9HCI6	787 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	EXOC1	Q9NV70	894 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	CDH22	Q9UJ99	828 aa		13.69	□□□□□ -0.22
CLPB-213	ENST00000544382	MYO10	Q9HD67	2058 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	CLUH	O75153	1309 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382		A0A1W2PQ27	194 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382		A0A1W2PQ64	194 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382		A0A1W2PQD8	194 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	GOLGA6L4	A6NEF3	574 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	C2CD4D	B7Z1M9	353 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382		M0QZQ0	153 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	ADAM12	O43184	909 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	ACTN4	O43707	911 aa	Known RBP	13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	GPR37L1	O60883	481 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	RFPL2	O75678	378 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	PAPLN	O95428	1278 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	ODC1	P11926	461 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	IGFBP6	P24592	240 aa	Predicted RBP	13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	GUCY2F	P51841	1108 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	CUL4B	Q13620	913 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	C9orf57	Q5W0N0	161 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	SLC8B1	Q6J4K2	584 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	ZDHHC14	Q8IZN3	488 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	GPD1L	Q8N335	351 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	SLC7A14	Q8TBB6	771 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	ZNF507	Q8TCN5	953 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	HPS3	Q969F9	1004 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	PAGE5	Q96GU1	130 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	ZNF560	Q96MR9	790 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	CBWD1	Q9BRT8	395 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	IKZF4	Q9H2S9	585 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	WDR6	Q9NNW5	1121 aa	Known RBP	13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	DPP3	Q9NY33	737 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	CGN	Q9P2M7	1197 aa	Known RBP	13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	DSE	Q9UL01	958 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	HPSE	Q9Y251	543 aa		13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.68	□□□□□ -0.22
CLPB-213	ENST00000544382	ZNF233	A6NK53	670 aa		13.67	□□□□□ -0.22
CLPB-213	ENST00000544382	PRRG1	O14668	218 aa		13.67	□□□□□ -0.22
CLPB-213	ENST00000544382	POU2F2	P09086	479 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms