RNA–Protein interactions for RNA: ENST00000543309.5

TRIM65-204, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-204ENST00000543309 SHHQ15465 462 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 WDR44Q5JSH3 913 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 C9orf50Q5SZB4 431 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 DPY19L2P1Q6NXN4 242 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 LRRC52Q8N7C0 313 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 HERVK_113Q902F9 699 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 SEMA4DQ92854 862 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 C18orf25Q96B23 403 aaPredicted RBP17.26■□□□□ 0.35
TRIM65-204ENST00000543309 FAM84AQ96KN4 292 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 PCMTD1Q96MG8 357 aaPredicted RBP17.26■□□□□ 0.35
TRIM65-204ENST00000543309 FAM161BQ96MY7 647 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 UROC1Q96N76 676 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 CASD1Q96PB1 797 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 LSM14BQ9BX40 385 aaKnown RBP17.26■□□□□ 0.35
TRIM65-204ENST00000543309 TTYH3Q9C0H2 523 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 SIX2Q9NPC8 291 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 MIOSQ9NXC5 875 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 APEX2Q9UBZ4 518 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 TUBGCP4Q9UGJ1 667 aa17.26■□□□□ 0.35
TRIM65-204ENST00000543309 FNDC1Q4ZHG4 1894 aaPredicted RBP17.25■□□□□ 0.35
TRIM65-204ENST00000543309 A0A1W2PQJ5 194 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 GOLGA6L6A8MZA4 724 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 PAX3P23760 479 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 PNPLA4P41247 253 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 AFF1P51825 1210 aaKnown RBP17.25■□□□□ 0.35
TRIM65-204ENST00000543309 SOX4Q06945 474 aaPredicted RBP17.25■□□□□ 0.35
TRIM65-204ENST00000543309 DSC1Q08554 894 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 TBX2Q13207 712 aaPredicted RBP17.25■□□□□ 0.35
TRIM65-204ENST00000543309 TUSC3Q13454 348 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 KLHDC7AQ5VTJ3 777 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 C9orf57Q5W0N0 161 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 OTOP2Q7RTS6 562 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 TMC6Q7Z403 805 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.25■□□□□ 0.354e-7■■■■■ 73.7
TRIM65-204ENST00000543309 DRC7Q8IY82 874 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 DDX27Q96GQ7 796 aaKnown RBP17.25■□□□□ 0.35
TRIM65-204ENST00000543309 NT5C1BQ96P26 610 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 XYLT2Q9H1B5 865 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 GANQ9H2C0 597 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 MTIF3Q9H2K0 278 aaKnown RBP17.25■□□□□ 0.35
TRIM65-204ENST00000543309 FAM207AQ9NSI2 230 aaPredicted RBP17.25■□□□□ 0.35
TRIM65-204ENST00000543309 TBC1D13Q9NVG8 400 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 CEP72Q9P209 647 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 INPP5FQ9Y2H2 1132 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 R3HCC1Q9Y3T6 440 aaKnown RBP17.25■□□□□ 0.35
TRIM65-204ENST00000543309 VCANP13611 3396 aa17.25■□□□□ 0.35
TRIM65-204ENST00000543309 COL4A6Q14031 1691 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 PIRO00625 290 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 DGKIO75912 1065 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 NOL4O94818 638 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 CST3P01034 146 aaPredicted RBP17.24■□□□□ 0.35
TRIM65-204ENST00000543309 KRT19P08727 400 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 TPM1P09493 284 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 UCHL3P15374 230 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 IBSPP21815 317 aaPredicted RBP17.24■□□□□ 0.35
TRIM65-204ENST00000543309 POLR2BP30876 1174 aaKnown RBP17.24■□□□□ 0.35
TRIM65-204ENST00000543309 KLK7P49862 253 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 EPHB4P54760 987 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 MYL6P60660 151 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 NOP14P78316 857 aaKnown RBP17.24■□□□□ 0.35
TRIM65-204ENST00000543309 GCNT1Q02742 428 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 CCDC173Q0VFZ6 552 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 MYO1EQ12965 1108 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 ENOSF1Q7L5Y1 443 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 PPFIBP1Q86W92 1011 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 LRRC43Q8N309 656 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 ZNF560Q96MR9 790 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.24■□□□□ 0.356e-8■■■■■ 28.6
TRIM65-204ENST00000543309 MYO6Q9UM54 1294 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 AGAP1Q9UPQ3 857 aa17.24■□□□□ 0.35
TRIM65-204ENST00000543309 PTPRSQ13332 1948 aa17.23■□□□□ 0.35
TRIM65-204ENST00000543309 POMCP01189 267 aa17.23■□□□□ 0.35
TRIM65-204ENST00000543309 GYPCP04921 128 aa17.23■□□□□ 0.35
TRIM65-204ENST00000543309 TBXAS1P24557 533 aaPredicted RBP17.23■□□□□ 0.35
TRIM65-204ENST00000543309 GUCY2FP51841 1108 aa17.23■□□□□ 0.35
TRIM65-204ENST00000543309 DEFB103AP81534 67 aa17.23■□□□□ 0.35
TRIM65-204ENST00000543309 SMAD3P84022 425 aaKnown RBP17.23■□□□□ 0.35
TRIM65-204ENST00000543309 PTPN21Q16825 1174 aa17.23■□□□□ 0.35
TRIM65-204ENST00000543309 ZNF699Q32M78 642 aa17.23■□□□□ 0.35
TRIM65-204ENST00000543309 PHOSPHO2Q8TCD6 241 aa17.23■□□□□ 0.35
TRIM65-204ENST00000543309 JAKMIP2Q96AA8 810 aa17.23■□□□□ 0.35
TRIM65-204ENST00000543309 ZNF689Q96CS4 500 aaPredicted RBP17.23■□□□□ 0.35
TRIM65-204ENST00000543309 HPDLQ96IR7 371 aa17.23■□□□□ 0.35
TRIM65-204ENST00000543309 SLC9A7Q96T83 725 aa17.23■□□□□ 0.35
TRIM65-204ENST00000543309 NAA15Q9BXJ9 866 aaKnown RBP17.23■□□□□ 0.35
TRIM65-204ENST00000543309 FAM124BQ9H5Z6 455 aaPredicted RBP17.23■□□□□ 0.35
TRIM65-204ENST00000543309 RC3H2Q9HBD1 1191 aaKnown RBP17.23■□□□□ 0.35
TRIM65-204ENST00000543309 CAPN11Q9UMQ6 739 aa17.23■□□□□ 0.35
TRIM65-204ENST00000543309 PRUNE2Q8WUY3 3088 aa17.23■□□□□ 0.35
TRIM65-204ENST00000543309 SPTBN5Q9NRC6 3674 aaKnown RBP17.22■□□□□ 0.35
TRIM65-204ENST00000543309 CARNS1A5YM72 827 aa17.22■□□□□ 0.35
TRIM65-204ENST00000543309 ZBBXA8MT70 800 aa17.22■□□□□ 0.35
TRIM65-204ENST00000543309 EPHB6O15197 1021 aa17.22■□□□□ 0.35
TRIM65-204ENST00000543309 P4HA1P13674 534 aa17.22■□□□□ 0.35
TRIM65-204ENST00000543309 RNASELQ05823 741 aaKnown RBP17.22■□□□□ 0.35
TRIM65-204ENST00000543309 UPP1Q16831 310 aa17.22■□□□□ 0.35
TRIM65-204ENST00000543309 ZNF667Q5HYK9 610 aa17.22■□□□□ 0.35
TRIM65-204ENST00000543309 RASIP1Q5U651 963 aa17.22■□□□□ 0.35
TRIM65-204ENST00000543309 PHLDB3Q6NSJ2 640 aa17.22■□□□□ 0.35
TRIM65-204ENST00000543309 FMNL3Q8IVF7 1028 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms