RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 C2orf42Q9NWW7 574 aa8.53□□□□□ -1.04
NPIPB4-215ENST00000542133 DDX56Q9NY93 547 aaKnown RBP8.53□□□□□ -1.04
NPIPB4-215ENST00000542133 GDE1Q9NZC3 331 aa8.53□□□□□ -1.04
NPIPB4-215ENST00000542133 DNMT3BQ9UBC3 853 aaKnown RBP8.53□□□□□ -1.04
NPIPB4-215ENST00000542133 ADAM28Q9UKQ2 775 aa8.53□□□□□ -1.04
NPIPB4-215ENST00000542133 ACAD8Q9UKU7 415 aa8.53□□□□□ -1.04
NPIPB4-215ENST00000542133 MRPS23Q9Y3D9 190 aaKnown RBP8.53□□□□□ -1.04
NPIPB4-215ENST00000542133 RBM19Q9Y4C8 960 aaKnown RBP8.53□□□□□ -1.04
NPIPB4-215ENST00000542133 PCDHGA5Q9Y5G8 931 aa8.53□□□□□ -1.04
NPIPB4-215ENST00000542133 TAF6LQ9Y6J9 622 aa8.53□□□□□ -1.04
NPIPB4-215ENST00000542133 PDCD11Q14690 1871 aaKnown RBP8.53□□□□□ -1.04
NPIPB4-215ENST00000542133 IGKV6-21A0A0C4DH24 114 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 ARL5CA6NH57 179 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 GOLGA6L6A8MZA4 724 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 WDR64B1ANS9 1081 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 NR1I2O75469 434 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 CYP21A2P08686 494 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 CEBPBP17676 345 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 RXRAP19793 462 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 HOXA6P31267 233 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 CLK2P49760 499 aaKnown RBP8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 NAPAP54920 295 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 LRRC32Q14392 662 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 ZC3H12AQ5D1E8 599 aaKnown RBP8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 WDR44Q5JSH3 913 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 TTC39BQ5VTQ0 682 aaPredicted RBP8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 KIAA1211LQ6NV74 962 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 PPP1R18Q6NYC8 613 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 FILIP1Q7Z7B0 1213 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 PDZD3Q86UT5 571 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 KBTBD6Q86V97 674 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 RHPN2Q8IUC4 686 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 MAP4K3Q8IVH8 894 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 KSR1Q8IVT5 923 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 ACRBPQ8NEB7 543 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 GAB3Q8WWW8 586 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 CRYGNQ8WXF5 182 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 PIK3R5Q8WYR1 880 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 IRF7Q92985 503 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 C8orf48Q96LL4 319 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 ZFP42Q96MM3 310 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 NLRP4Q96MN2 994 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 CEP89Q96ST8 783 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 GAD1Q99259 594 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 TRMT61BQ9BVS5 477 aaKnown RBP8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 COLEC11Q9BWP8 271 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 LRRC27Q9C0I9 530 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 PIF1Q9H611 641 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 ZNF334Q9HCZ1 680 aaPredicted RBP8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 UBN1Q9NPG3 1134 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 TRPV5Q9NQA5 729 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 VPS45Q9NRW7 570 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 NRBP2Q9NSY0 501 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 RBM12Q9NTZ6 932 aaKnown RBP8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 MIOSQ9NXC5 875 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 RCAN3Q9UKA8 241 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 NEUROG3Q9Y4Z2 214 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 SAMM50Q9Y512 469 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 CEP83Q9Y592 693 aa8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 SF3B1O75533 1304 aaKnown RBP eCLIP8.52□□□□□ -1.05
NPIPB4-215ENST00000542133 VWA8A3KMH1 1905 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 TMEM150BA6NC51 233 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 C4orf47A7E2U8 309 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 NRG2O14511 850 aaPredicted RBP8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 ADAM12O43184 909 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 RPP40O75818 363 aaKnown RBP8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 RHOP08100 348 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 FAM163BP0C2L3 166 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 ITGA4P13612 1032 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 NAT1P18440 290 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 CCNE1P24864 410 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 HSD3B2P26439 372 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 HOXA11P31270 313 aaPredicted RBP8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 ADCY7P51828 1080 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 PSMD5Q16401 504 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 MTERF2Q49AM1 385 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 TMTC3Q6ZXV5 915 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 CACNA2D4Q7Z3S7 1137 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 PROSER1Q86XN7 944 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 PARP9Q8IXQ6 854 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 MB21D2Q8IYB1 491 aaPredicted RBP8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 CNNM3Q8NE01 707 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 NCOA7Q8NI08 942 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 LNX1Q8TBB1 728 aaPredicted RBP8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 GOLGA1Q92805 767 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 GLMNQ92990 594 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 BBC3Q96PG8 261 aaPredicted RBP8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 DISC1Q9NRI5 854 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 SUCLA2Q9P2R7 463 aaPredicted RBP8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 GPSM3Q9Y4H4 160 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 IPPQ9Y573 584 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 NCANO14594 1321 aa8.51□□□□□ -1.05
NPIPB4-215ENST00000542133 EML5Q05BV3 1969 aa8.5□□□□□ -1.05
NPIPB4-215ENST00000542133 CELSR3Q9NYQ7 3312 aa8.5□□□□□ -1.05
NPIPB4-215ENST00000542133 PABPN1LA6NDY0 278 aaKnown RBP8.5□□□□□ -1.05
NPIPB4-215ENST00000542133 CYSRT1A8MQ03 144 aa8.5□□□□□ -1.05
NPIPB4-215ENST00000542133 E7EWF7 191 aa8.5□□□□□ -1.05
NPIPB4-215ENST00000542133 HIP1O00291 1037 aa8.5□□□□□ -1.05
NPIPB4-215ENST00000542133 ARNTLO00327 626 aa8.5□□□□□ -1.05
NPIPB4-215ENST00000542133 IFRD1O00458 451 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms