RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 KCTD17Q8N5Z5 321 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 ATL2Q8NHH9 583 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 NT5C1BQ96P26 610 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 RBM15Q96T37 977 aaKnown RBP eCLIP21.56■■□□□ 1.04
TMEM260-203ENST00000539559 PLVAPQ9BX97 442 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 COL20A1Q9P218 1284 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 ADGRA3Q8IWK6 1321 aa21.56■■□□□ 1.04
TMEM260-203ENST00000539559 H0Y3Z8 333 aa21.55■■□□□ 1.04
TMEM260-203ENST00000539559 CCNB1P14635 433 aa21.55■■□□□ 1.04
TMEM260-203ENST00000539559 MYBPC2Q14324 1141 aa21.55■■□□□ 1.04
TMEM260-203ENST00000539559 DLGAP5Q15398 846 aa21.55■■□□□ 1.04
TMEM260-203ENST00000539559 P3H1Q32P28 736 aa21.55■■□□□ 1.04
TMEM260-203ENST00000539559 RNF43Q68DV7 783 aa21.55■■□□□ 1.04
TMEM260-203ENST00000539559 PARD3BQ8TEW8 1205 aa21.55■■□□□ 1.04
TMEM260-203ENST00000539559 GMLQ99445 158 aa21.55■■□□□ 1.04
TMEM260-203ENST00000539559 SAYSD1Q9NPB0 183 aa21.55■■□□□ 1.04
TMEM260-203ENST00000539559 COL2A1P02458 1487 aaPredicted RBP21.55■■□□□ 1.04
TMEM260-203ENST00000539559 CBX6O95503 412 aa21.55■■□□□ 1.04
TMEM260-203ENST00000539559 GM2AP17900 193 aa21.55■■□□□ 1.04
TMEM260-203ENST00000539559 PIM2Q9P1W9 311 aa21.55■■□□□ 1.04
TMEM260-203ENST00000539559 PHTF1Q9UMS5 762 aa21.55■■□□□ 1.04
TMEM260-203ENST00000539559 FAM47DPA6NHR8 397 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 KRT10P13645 584 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 GCAP28676 217 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 MTM1Q13496 603 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 PKN2Q16513 984 aaKnown RBP21.54■■□□□ 1.04
TMEM260-203ENST00000539559 NIM1KQ8IY84 436 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 MCOLN2Q8IZK6 566 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 FBF1Q8TES7 1133 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 AGBL1Q96MI9 1066 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 MXRA8Q9BRK3 442 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 FHDC1Q9C0D6 1143 aaPredicted RBP21.54■■□□□ 1.04
TMEM260-203ENST00000539559 KIAA1683Q9H0B3 1180 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 RAB20Q9NX57 234 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 ZNRF3Q9ULT6 936 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 EXOC1LA0A1B0GW35 172 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 SORBS3O60504 671 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 BANF1O75531 89 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 FDX1P10109 184 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 GCKP35557 465 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 MAGEA4P43358 317 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 TGFB2P61812 414 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 IL9RQ01113 521 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 TAF11Q15544 211 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 MIS18BP1Q6P0N0 1132 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 SV2AQ7L0J3 742 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 MAML1Q92585 1016 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 LGALS13Q9UHV8 139 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 NEU2Q9Y3R4 380 aa21.54■■□□□ 1.04
TMEM260-203ENST00000539559 TCP10L2B9ZVM9 353 aa21.53■■□□□ 1.04
TMEM260-203ENST00000539559 C11orf70Q9BRQ4 267 aa21.53■■□□□ 1.04
TMEM260-203ENST00000539559 ZBTB12Q9Y330 459 aaPredicted RBP21.53■■□□□ 1.04
TMEM260-203ENST00000539559 PSME4Q14997 1843 aa21.53■■□□□ 1.04
TMEM260-203ENST00000539559 P4HBP07237 508 aaKnown RBP21.53■■□□□ 1.04
TMEM260-203ENST00000539559 TCF4P15884 667 aa21.53■■□□□ 1.04
TMEM260-203ENST00000539559 GTF2BQ00403 316 aa21.53■■□□□ 1.04
TMEM260-203ENST00000539559 ZFYVE27Q5T4F4 411 aa21.53■■□□□ 1.04
TMEM260-203ENST00000539559 LDHDQ86WU2 507 aa21.53■■□□□ 1.04
TMEM260-203ENST00000539559 FBXL13Q8NEE6 735 aa21.53■■□□□ 1.04
TMEM260-203ENST00000539559 GRK7Q8WTQ7 553 aa21.53■■□□□ 1.04
TMEM260-203ENST00000539559 VTI1AQ96AJ9 217 aa21.53■■□□□ 1.04
TMEM260-203ENST00000539559 HAUS1Q96CS2 278 aa21.53■■□□□ 1.04
TMEM260-203ENST00000539559 GLIS2Q9BZE0 524 aaPredicted RBP21.53■■□□□ 1.04
TMEM260-203ENST00000539559 HERC5Q9UII4 1024 aaKnown RBP21.53■■□□□ 1.04
TMEM260-203ENST00000539559 CLRN2A0PK11 232 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 ZBTB7AO95365 584 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 FGFR1P11362 822 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 EPHB2P29323 1055 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 CNGA1P29973 690 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 YWHABP31946 246 aaKnown RBP21.52■■□□□ 1.04
TMEM260-203ENST00000539559 RPA3P35244 121 aaPredicted RBP21.52■■□□□ 1.04
TMEM260-203ENST00000539559 SPOPLQ6IQ16 392 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 KIFAP3Q92845 792 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 C12orf65Q9H3J6 166 aaKnown RBP21.52■■□□□ 1.04
TMEM260-203ENST00000539559 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.52■■□□□ 1.04
TMEM260-203ENST00000539559 EURLQ9NYK6 297 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 ASMTLO95671 621 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 UNGP13051 313 aaPredicted RBP21.52■■□□□ 1.04
TMEM260-203ENST00000539559 KRT15P19012 456 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 POLGP54098 1239 aaPredicted RBP21.52■■□□□ 1.04
TMEM260-203ENST00000539559 KLF1Q13351 362 aaPredicted RBP21.52■■□□□ 1.04
TMEM260-203ENST00000539559 SLC1A5Q15758 541 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 PCNX4Q63HM2 1172 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 TTC8Q8TAM2 541 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 ACSF2Q96CM8 615 aaPredicted RBP21.52■■□□□ 1.04
TMEM260-203ENST00000539559 KIAA1586Q9HCI6 787 aa21.52■■□□□ 1.04
TMEM260-203ENST00000539559 ZNF70Q9UC06 446 aaPredicted RBP21.52■■□□□ 1.04
TMEM260-203ENST00000539559 A0A1W2PPM1 405 aa21.52■■□□□ 1.03
TMEM260-203ENST00000539559 WDR91A4D1P6 747 aa21.52■■□□□ 1.03
TMEM260-203ENST00000539559 DHX15O43143 795 aaKnown RBP21.52■■□□□ 1.03
TMEM260-203ENST00000539559 MKRN3Q13064 507 aaKnown RBP21.52■■□□□ 1.03
TMEM260-203ENST00000539559 PPP1R21Q6ZMI0 780 aa21.52■■□□□ 1.03
TMEM260-203ENST00000539559 C12orf56Q8IXR9 622 aa21.52■■□□□ 1.03
TMEM260-203ENST00000539559 ANKRD35Q8N283 1001 aa21.52■■□□□ 1.03
TMEM260-203ENST00000539559 LRRC37BQ96QE4 947 aa21.52■■□□□ 1.03
TMEM260-203ENST00000539559 PLCD4Q9BRC7 762 aa21.52■■□□□ 1.03
TMEM260-203ENST00000539559 TMEM8AQ9HCN3 771 aa21.52■■□□□ 1.03
TMEM260-203ENST00000539559 HOMER2Q9NSB8 354 aa21.52■■□□□ 1.03
TMEM260-203ENST00000539559 COL4A5P29400 1685 aa21.51■■□□□ 1.03
TMEM260-203ENST00000539559 NFIBO00712 420 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms