RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 TMCO5BA8MYB1 307 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 DYNC1I1O14576 645 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 MMEP08473 750 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 TMEM270Q6UE05 265 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 DDX1Q92499 740 aaKnown RBP25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 KIF12Q96FN5 646 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 SNX27Q96L92 541 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 SNTG2Q9NY99 539 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 SIX4Q9UIU6 781 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 PCDHGC5Q9Y5F6 944 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 ATP1A1P05023 1023 aaKnown RBP25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 AMPD2Q01433 879 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 PTGISQ16647 500 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 ZNF667Q5HYK9 610 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 UBR7Q8N806 425 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 RBBP8NLQ8NC74 664 aaPredicted RBP25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 CALR3Q96L12 384 aaKnown RBP25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 TSPAN18Q96SJ8 248 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 TSEN34Q9BSV6 310 aaKnown RBP25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 TSKSQ9UJT2 592 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 SAR1BQ9Y6B6 198 aa25.48■■□□□ 1.67
PTPMT1-205ENST00000534775 ENC1O14682 589 aa25.47■■□□□ 1.67
PTPMT1-205ENST00000534775 ITGB3P05106 788 aa25.47■■□□□ 1.67
PTPMT1-205ENST00000534775 GRK4P32298 578 aa25.47■■□□□ 1.67
PTPMT1-205ENST00000534775 NOP2P46087 812 aaKnown RBP25.47■■□□□ 1.67
PTPMT1-205ENST00000534775 ACLYP53396 1101 aa25.47■■□□□ 1.67
PTPMT1-205ENST00000534775 WHAMMP3Q1A5X7 153 aa25.47■■□□□ 1.67
PTPMT1-205ENST00000534775 PALB2Q86YC2 1186 aa25.47■■□□□ 1.67
PTPMT1-205ENST00000534775 RFFLQ8WZ73 363 aa25.47■■□□□ 1.67
PTPMT1-205ENST00000534775 VRTNQ9H8Y1 702 aa25.47■■□□□ 1.67
PTPMT1-205ENST00000534775 ACP6Q9NPH0 428 aa25.47■■□□□ 1.67
PTPMT1-205ENST00000534775 NOC2LQ9Y3T9 749 aaKnown RBP25.47■■□□□ 1.67
PTPMT1-205ENST00000534775 MYH10P35580 1976 aa25.46■■□□□ 1.67
PTPMT1-205ENST00000534775 FTLP02792 175 aaPredicted RBP25.46■■□□□ 1.67
PTPMT1-205ENST00000534775 P4HA1P13674 534 aa25.46■■□□□ 1.67
PTPMT1-205ENST00000534775 RBP5P82980 135 aa25.46■■□□□ 1.67
PTPMT1-205ENST00000534775 ITGA7Q13683 1181 aa25.46■■□□□ 1.67
PTPMT1-205ENST00000534775 FAM228AQ86W67 206 aa25.46■■□□□ 1.67
PTPMT1-205ENST00000534775 CEP112Q8N8E3 955 aa25.46■■□□□ 1.67
PTPMT1-205ENST00000534775 PCDHB18PQ96TA0 734 aa25.46■■□□□ 1.67
PTPMT1-205ENST00000534775 CARD6Q9BX69 1037 aa25.46■■□□□ 1.67
PTPMT1-205ENST00000534775 SENP6Q9GZR1 1112 aaPredicted RBP25.46■■□□□ 1.67
PTPMT1-205ENST00000534775 DPP3Q9NY33 737 aa25.46■■□□□ 1.67
PTPMT1-205ENST00000534775 TAS2R14Q9NYV8 317 aa25.46■■□□□ 1.67
PTPMT1-205ENST00000534775 GRIN2DO15399 1336 aa25.46■■□□□ 1.67
PTPMT1-205ENST00000534775 PALMO75781 387 aa25.45■■□□□ 1.67
PTPMT1-205ENST00000534775 STAU1O95793 577 aaKnown RBP25.45■■□□□ 1.67
PTPMT1-205ENST00000534775 SCARA3Q6AZY7 606 aa25.45■■□□□ 1.67
PTPMT1-205ENST00000534775 TRIM72Q6ZMU5 477 aa25.45■■□□□ 1.67
PTPMT1-205ENST00000534775 FRMPD3Q5JV73 1810 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 RPS6KA5O75582 802 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 ABCB4P21439 1286 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 GNA15P30679 374 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 ASPAP45381 313 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 ZNF132P52740 706 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 PTK7Q13308 1070 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 UBXN11Q5T124 520 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 DNAAF5Q86Y56 855 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 RHOT2Q8IXI1 618 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 CXorf38Q8TB03 319 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 GLT1D1Q96MS3 346 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 NXF3Q9H4D5 531 aaKnown RBP25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 CISHQ9NSE2 258 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 CNTN3Q9P232 1028 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 NOD1Q9Y239 953 aa25.45■■□□□ 1.66
PTPMT1-205ENST00000534775 PDCD11Q14690 1871 aaKnown RBP25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 RECQL4O94761 1208 aa25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 PRLRP16471 622 aa25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 POLR2BP30876 1174 aaKnown RBP25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 GPC5P78333 572 aa25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 MGAT3Q09327 533 aa25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 CLEC16AQ2KHT3 1053 aa25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 PPP1R2P3Q6NXS1 205 aa25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 BEST2Q8NFU1 509 aa25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 BCO2Q9BYV7 579 aa25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 THAP2Q9H0W7 228 aa25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 PDCL3Q9H2J4 239 aa25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 FAM124BQ9H5Z6 455 aaPredicted RBP25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 CHST12Q9NRB3 414 aa25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 NXF1Q9UBU9 619 aaKnown RBP25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 AGAP1Q9UPQ3 857 aa25.44■■□□□ 1.66
PTPMT1-205ENST00000534775 GRID2IPA4D2P6 1211 aa25.43■■□□□ 1.66
PTPMT1-205ENST00000534775 TCEAL1Q15170 157 aa25.43■■□□□ 1.66
PTPMT1-205ENST00000534775 WDR72Q3MJ13 1102 aa25.43■■□□□ 1.66
PTPMT1-205ENST00000534775 TWF2Q6IBS0 349 aaKnown RBP25.43■■□□□ 1.66
PTPMT1-205ENST00000534775 ACAD10Q6JQN1 1059 aa25.43■■□□□ 1.66
PTPMT1-205ENST00000534775 ALKAL1Q6UXT8 129 aa25.43■■□□□ 1.66
PTPMT1-205ENST00000534775 SYCE1Q8N0S2 351 aa25.43■■□□□ 1.66
PTPMT1-205ENST00000534775 TPCN2Q8NHX9 752 aa25.43■■□□□ 1.66
PTPMT1-205ENST00000534775 WNT8BQ93098 351 aa25.43■■□□□ 1.66
PTPMT1-205ENST00000534775 HPDLQ96IR7 371 aa25.43■■□□□ 1.66
PTPMT1-205ENST00000534775 CYP3A43Q9HB55 503 aa25.43■■□□□ 1.66
PTPMT1-205ENST00000534775 SNX12Q9UMY4 172 aa25.43■■□□□ 1.66
PTPMT1-205ENST00000534775 HES2Q9Y543 173 aa25.43■■□□□ 1.66
PTPMT1-205ENST00000534775 GPR182O15218 404 aa25.42■■□□□ 1.66
PTPMT1-205ENST00000534775 XPOTO43592 962 aaKnown RBP25.42■■□□□ 1.66
PTPMT1-205ENST00000534775 CHRNA1P02708 482 aa25.42■■□□□ 1.66
PTPMT1-205ENST00000534775 CTSHP09668 335 aa25.42■■□□□ 1.66
PTPMT1-205ENST00000534775 TCP1P17987 556 aaKnown RBP25.42■■□□□ 1.66
PTPMT1-205ENST00000534775 CD58P19256 250 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms