RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SHBGP04278 402 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 FCER1AP12319 257 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 CCNFP41002 786 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 ARFIP2P53365 341 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 CETN1Q12798 172 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 PARP6Q2NL67 630 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 CNPY1Q3B7I2 92 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 KIAA1755Q5JYT7 1200 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 KRT79Q5XKE5 535 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 RNF169Q8NCN4 708 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 CYP2W1Q8TAV3 490 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 SLC26A7Q8TE54 656 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 MMP19Q99542 508 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 SH3GL1Q99961 368 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 TRIM51Q9BSJ1 452 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 RNF26Q9BY78 433 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 ANO3Q9BYT9 981 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 ROPN1BQ9BZX4 212 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 ROPN1Q9HAT0 212 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 METTL14Q9HCE5 456 aaKnown RBP7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 OLFML3Q9NRN5 406 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 GID8Q9NWU2 228 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 ARHGEF38Q9NXL2 777 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 SCHIP1Q9P0W5 487 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 ZNF212Q9UDV6 495 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 DDX25Q9UHL0 483 aaKnown RBP7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 FBXO2Q9UK22 296 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 FEM1BQ9UK73 627 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 RPL26L1Q9UNX3 145 aaKnown RBP7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 PHF24Q9UPV7 400 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 PRELID1Q9Y255 219 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 TMX2Q9Y320 296 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 WDR91A4D1P6 747 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 POTEFA5A3E0 1075 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 POTEMA6NI47 508 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 FGFR4P22455 802 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 EIF4BP23588 611 aaKnown RBP7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 CD151P48509 253 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 GTF2A2P52657 109 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 POLGP54098 1239 aaPredicted RBP7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 ERVK-9P63128 1117 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 GRIN1Q05586 938 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 BNIP1Q12981 228 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 NR1H3Q13133 447 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 SEC23AQ15436 765 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 ANKRD20A4Q4UJ75 823 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 TMCO4Q5TGY1 634 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 NEK8Q86SG6 692 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 DDI1Q8WTU0 396 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 MTBPQ96DY7 904 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 TAAR1Q96RJ0 339 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 PCMTD2Q9NV79 361 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 AIPL1Q9NZN9 384 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 PCDHA6Q9UN73 950 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 PCDHA12Q9UN75 941 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 LRRC42Q9Y546 428 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 TRIM17Q9Y577 477 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 PCDHA8Q9Y5H6 950 aa7.17□□□□□ -1.26
TGFBR3-209ENST00000532540 RSPH10B2B2RC85 870 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 BTBD19C9JJ37 291 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 GIPC1O14908 333 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 LDHAP00338 332 aaKnown RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 PAEPP09466 180 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 RSPH10BP0C881 870 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 RARAP10276 462 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 ATF2P15336 505 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 TRIP10Q15642 601 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 KYNUQ16719 465 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 FAM160B2Q86V87 743 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 ASAP3Q8TDY4 903 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 DCAF4Q8WV16 495 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 PGM2Q96G03 612 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 MMTAG2Q9BU76 263 aaKnown RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 TIPINQ9BVW5 301 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 SPATA16Q9BXB7 569 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 TBC1D10AQ9BXI6 508 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 ZFYVE28Q9HCC9 887 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 PPARGC1AQ9UBK2 798 aaKnown RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 SLC12A6Q9UHW9 1150 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 RIPK3Q9Y572 518 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 EXOC1LA0A1B0GW35 172 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 SSU72P8A0A1W2PR75 194 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 PPP1R3GB7ZBB8 358 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 ITGA9Q13797 1035 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 PTPAQ15257 358 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 DCAF17Q5H9S7 520 aaPredicted RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 ALKBH5Q6P6C2 394 aaKnown RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 BTNL9Q6UXG8 535 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 SGMS1Q86VZ5 419 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 GPRC5AQ8NFJ5 357 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 ZC3H15Q8WU90 426 aaKnown RBP7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 CCDC138Q96M89 665 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 CCT7Q99832 543 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 ZNF577Q9BSK1 485 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 TLR10Q9BXR5 811 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 UBN1Q9NPG3 1134 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 TJP1Q07157 1748 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 SFI1A8K8P3 1242 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 MATN2O00339 956 aa7.16□□□□□ -1.26
TGFBR3-209ENST00000532540 DYNC1LI2O43237 492 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms