RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 Q6ZS52 159 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 RUFY3Q7L099 469 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 CACNA2D4Q7Z3S7 1137 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 HAUS6Q7Z4H7 955 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 SYNPOQ8N3V7 929 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 PIGOQ8TEQ8 1089 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 ZSWIM3Q96MP5 696 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 ARRDC1-AS1Q9H2J1 176 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 RBM12Q9NTZ6 932 aaKnown RBP11.46□□□□□ -0.57
COPB1-207ENST00000529866 AFF4Q9UHB7 1163 aaKnown RBP11.46□□□□□ -0.57
COPB1-207ENST00000529866 NUB1Q9Y5A7 615 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 PCDHGA5Q9Y5G8 931 aa11.46□□□□□ -0.57
COPB1-207ENST00000529866 FRYQ5TBA9 3013 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 SPECC1L-ADORA2AF8WAN1 911 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 PODXLO00592 558 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 TM4SF5O14894 197 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 AXIN1O15169 862 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 RPP40O75818 363 aaKnown RBP11.45□□□□□ -0.58
COPB1-207ENST00000529866 EPN2O95208 641 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 CCDC192P0DO97 292 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 MYL4P12829 197 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 NAMPTP43490 491 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 EPHA5P54756 1037 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 TWF1Q12792 350 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 STK3Q13188 491 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 PPP2R5AQ15172 486 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 CALCRLQ16602 461 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 CTXN3Q4LDR2 81 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 UNQ6494/PRO21346Q6UXR6 183 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 RALGPS2Q86X27 583 aaPredicted RBP11.45□□□□□ -0.58
COPB1-207ENST00000529866 C3orf58Q8NDZ4 430 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 GAB3Q8WWW8 586 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 ZNF274Q96GC6 653 aaPredicted RBP11.45□□□□□ -0.58
COPB1-207ENST00000529866 CXCL16Q9H2A7 254 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 GOLGA2P5Q9HBQ8 144 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 BRMS1Q9HCU9 246 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 FBXL5Q9UKA1 691 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 SDK1Q7Z5N4 2213 aa11.45□□□□□ -0.58
COPB1-207ENST00000529866 ASPMQ8IZT6 3477 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 CCDC163A0A0D9SF12 145 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 MYBPHLA2RUH7 354 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 TTLL13PA6NNM8 815 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 DPYSL4O14531 572 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 KCNK5O95279 499 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 SEC24AO95486 1093 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 CPB1P15086 417 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 CTHP32929 405 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 EFNA5P52803 228 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 FCHO2Q0JRZ9 810 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 PLD1Q13393 1074 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 TEAD2Q15562 447 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 ATF7IP2Q5U623 682 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 RNF43Q68DV7 783 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 PSAPL1Q6NUJ1 521 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 CD300LGQ6UXG3 332 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 HS6ST3Q8IZP7 471 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 APPL2Q8NEU8 664 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 CCDC94Q9BW85 323 aaPredicted RBP11.44□□□□□ -0.58
COPB1-207ENST00000529866 LSM14BQ9BX40 385 aaKnown RBP11.44□□□□□ -0.58
COPB1-207ENST00000529866 CCDC113Q9H0I3 377 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 TTC12Q9H892 705 aaPredicted RBP11.44□□□□□ -0.58
COPB1-207ENST00000529866 VPS45Q9NRW7 570 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 GJB4Q9NTQ9 266 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 ZMIZ1Q9ULJ6 1067 aa11.44□□□□□ -0.58
COPB1-207ENST00000529866 STK36Q9NRP7 1315 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 SMIM28A0A1B0GU29 152 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 TMEM8BA6NDV4 472 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 NRG2O14511 850 aaPredicted RBP11.43□□□□□ -0.58
COPB1-207ENST00000529866 NEMFO60524 1076 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 MOSPD3O75425 235 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 AKAP3O75969 853 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 GJA1P17302 382 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 MPLP40238 635 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 RAP1GAPP47736 663 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 SOX9P48436 509 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 CCINQ13939 588 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 CCDC6Q16204 474 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 ARHGAP29Q52LW3 1261 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 EEF1DP3Q658K8 133 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 TXNDC11Q6PKC3 985 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 SHKBP1Q8TBC3 707 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 OXER1Q8TDS5 423 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 IFT74Q96LB3 600 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 CEP72Q9P209 647 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 YIPF1Q9Y548 306 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 CYP46A1Q9Y6A2 500 aa11.43□□□□□ -0.58
COPB1-207ENST00000529866 NCANO14594 1321 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 NOTCH4Q99466 2003 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 ZZEF1O43149 2961 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 A0A1W2PRU2 124 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 ARHGEF35A5YM69 484 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 C1QTNF9BB2RNN3 333 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 EPB41L2O43491 1005 aaKnown RBP11.42□□□□□ -0.58
COPB1-207ENST00000529866 ATG13O75143 517 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 C1QTNF9P0C862 333 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 IGFBP6P24592 240 aaPredicted RBP11.42□□□□□ -0.58
COPB1-207ENST00000529866 RPL9P32969 192 aaKnown RBP11.42□□□□□ -0.58
COPB1-207ENST00000529866 MCM4P33991 863 aa11.42□□□□□ -0.58
COPB1-207ENST00000529866 KRT2P35908 639 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms