RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 ELSPBP1Q96BH3 223 aa17.05■□□□□ 0.32
CTSB-215ENST00000528965 BORCS6Q96GS4 357 aa17.05■□□□□ 0.32
CTSB-215ENST00000528965 NELL2Q99435 816 aa17.05■□□□□ 0.32
CTSB-215ENST00000528965 HINFPQ9BQA5 517 aa17.05■□□□□ 0.32
CTSB-215ENST00000528965 OXCT2Q9BYC2 517 aaPredicted RBP17.05■□□□□ 0.32
CTSB-215ENST00000528965 PLEKHA5Q9HAU0 1116 aa17.05■□□□□ 0.32
CTSB-215ENST00000528965 LTB4R2Q9NPC1 389 aa17.05■□□□□ 0.32
CTSB-215ENST00000528965 SPATA6Q9NWH7 488 aaPredicted RBP17.05■□□□□ 0.32
CTSB-215ENST00000528965 AFF4Q9UHB7 1163 aaKnown RBP17.05■□□□□ 0.32
CTSB-215ENST00000528965 PCDHB8Q9UN66 801 aa17.05■□□□□ 0.32
CTSB-215ENST00000528965 CITO14578 2027 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 TBC1D4O60343 1298 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 KINO60870 393 aaKnown RBP17.04■□□□□ 0.32
CTSB-215ENST00000528965 PLA2G4BP0C869 781 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 ID4P47928 161 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 MRPL58Q14197 206 aaKnown RBP17.04■□□□□ 0.32
CTSB-215ENST00000528965 ZNF528Q3MIS6 628 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 ZBTB41Q5SVQ8 909 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 TPRG1Q6ZUI0 275 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 ERMP1Q7Z2K6 904 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 DDX12PQ92771 950 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 ZBTB45Q96K62 511 aaPredicted RBP17.04■□□□□ 0.32
CTSB-215ENST00000528965 AK8Q96MA6 479 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 TBC1D32Q96NH3 1257 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 FBXO4Q9UKT5 387 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 ODF2LQ9ULJ1 636 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 DOCK6Q96HP0 2047 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 TRIP11Q15643 1979 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 MIA3Q5JRA6 1907 aa17.04■□□□□ 0.32
CTSB-215ENST00000528965 SPTBN4Q9H254 2564 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 FAM170BA6NMN3 283 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 SPTLC1O15269 473 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 CXCL8P10145 99 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 GLULP15104 373 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 ABCD1P33897 745 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 LIG4P49917 911 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 SLC12A3P55017 1021 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 NCKAP1LP55160 1127 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 YWHAHQ04917 246 aaPredicted RBP17.03■□□□□ 0.32
CTSB-215ENST00000528965 ADCY1Q08828 1119 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 PLD1Q13393 1074 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 SLC10A6Q3KNW5 377 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 C8orf34Q49A92 452 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 TMEM119Q4V9L6 283 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 PRSS36Q5K4E3 855 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 ZNF852Q6ZMS4 543 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 KIF12Q96FN5 646 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 CALML4Q96GE6 196 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 ZNF512Q96ME7 567 aaPredicted RBP17.03■□□□□ 0.32
CTSB-215ENST00000528965 PNMA5Q96PV4 448 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 TSPAN18Q96SJ8 248 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 ZFP14Q9HCL3 533 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 ASAH2Q9NR71 780 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 TUBGCP4Q9UGJ1 667 aa17.03■□□□□ 0.32
CTSB-215ENST00000528965 UBQLN1Q9UMX0 589 aaKnown RBP17.03■□□□□ 0.32
CTSB-215ENST00000528965 HNRNPDLO14979 420 aaKnown RBP17.02■□□□□ 0.32
CTSB-215ENST00000528965 LRRN2O75325 713 aa17.02■□□□□ 0.32
CTSB-215ENST00000528965 BMP15O95972 392 aa17.02■□□□□ 0.32
CTSB-215ENST00000528965 CYP3A5P20815 502 aa17.02■□□□□ 0.32
CTSB-215ENST00000528965 LRPAP1P30533 357 aa17.02■□□□□ 0.32
CTSB-215ENST00000528965 SEZ6Q53EL9 994 aa17.02■□□□□ 0.32
CTSB-215ENST00000528965 USP37Q86T82 979 aa17.02■□□□□ 0.32
CTSB-215ENST00000528965 RASSF8Q8NHQ8 419 aa17.02■□□□□ 0.32
CTSB-215ENST00000528965 KCNN1Q92952 543 aa17.02■□□□□ 0.32
CTSB-215ENST00000528965 PLIN2Q99541 437 aa17.02■□□□□ 0.32
CTSB-215ENST00000528965 BRD9Q9H8M2 597 aa17.02■□□□□ 0.32
CTSB-215ENST00000528965 EP300Q09472 2414 aaPredicted RBP17.01■□□□□ 0.31
CTSB-215ENST00000528965 K7ENM7 598 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 M0QZQ0 153 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 MAN2B1O00754 1011 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 FAM13AO94988 1023 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 SEC24AO95486 1093 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 PAX3P23760 479 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 GJB2P29033 226 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 UBA7P41226 1012 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 RPS9P46781 194 aaKnown RBP17.01■□□□□ 0.31
CTSB-215ENST00000528965 MCM2P49736 904 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 TWF1Q12792 350 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 TANGO2Q6ICL3 276 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 HAUS6Q7Z4H7 955 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 GPBP1Q86WP2 473 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 DEPDC1BQ8WUY9 529 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 RUBCNQ92622 972 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 TMX3Q96JJ7 454 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 TRMT61BQ9BVS5 477 aaKnown RBP17.01■□□□□ 0.31
CTSB-215ENST00000528965 PCDHGA2Q9Y5H1 932 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 VPS13AQ96RL7 3174 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 NOTCH4Q99466 2003 aa17.01■□□□□ 0.31
CTSB-215ENST00000528965 TTC26A0AVF1 554 aa17■□□□□ 0.31
CTSB-215ENST00000528965 OR6C75A6NL08 312 aa17■□□□□ 0.31
CTSB-215ENST00000528965 MEFVO15553 781 aaPredicted RBP17■□□□□ 0.31
CTSB-215ENST00000528965 TBCAO75347 108 aaKnown RBP17■□□□□ 0.31
CTSB-215ENST00000528965 OAZ2O95190 189 aa17■□□□□ 0.31
CTSB-215ENST00000528965 KRT18P05783 430 aaKnown RBP17■□□□□ 0.31
CTSB-215ENST00000528965 FCARP24071 287 aa17■□□□□ 0.31
CTSB-215ENST00000528965 TARSP26639 723 aaKnown RBP17■□□□□ 0.31
CTSB-215ENST00000528965 CACNB1Q02641 598 aaPredicted RBP17■□□□□ 0.31
CTSB-215ENST00000528965 PDCD11Q14690 1871 aaKnown RBP17■□□□□ 0.31
CTSB-215ENST00000528965 FAM78AQ5JUQ0 283 aa17■□□□□ 0.31
CTSB-215ENST00000528965 DSTYKQ6XUX3 929 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms