RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 NUCB1Q02818 461 aa14.97□□□□□ -0.01
SSRP1-203ENST00000526696 STXBP5Q5T5C0 1151 aa14.97□□□□□ -0.01
SSRP1-203ENST00000526696 ANKS3Q6ZW76 656 aa14.97□□□□□ -0.01
SSRP1-203ENST00000526696 RAB44Q7Z6P3 723 aaPredicted RBP14.97□□□□□ -0.01
SSRP1-203ENST00000526696 CAMKK1Q8N5S9 505 aa14.97□□□□□ -0.01
SSRP1-203ENST00000526696 C3orf58Q8NDZ4 430 aa14.97□□□□□ -0.01
SSRP1-203ENST00000526696 FAM200AQ8TCP9 573 aa14.97□□□□□ -0.01
SSRP1-203ENST00000526696 ASAP3Q8TDY4 903 aa14.97□□□□□ -0.01
SSRP1-203ENST00000526696 INVSQ9Y283 1065 aa14.97□□□□□ -0.01
SSRP1-203ENST00000526696 PTPRDP23468 1912 aa14.97□□□□□ -0.01
SSRP1-203ENST00000526696 MYO16Q9Y6X6 1858 aa14.97□□□□□ -0.01
SSRP1-203ENST00000526696 CCDC194A0A1B0GVG4 234 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 TMEM189-UBE2V1I3L0A0 370 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 ZBTB39O15060 712 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 SGSM2O43147 1006 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 PRKCBP05771 671 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 THP07101 528 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 RFC5P40937 340 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 BRCC3P46736 316 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 CAPSQ13938 189 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 Q4G0T1 1027 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 TMEM196Q5HYL7 178 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 PMS2CLQ68D20 193 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 ARID3BQ8IVW6 561 aaPredicted RBP14.96□□□□□ -0.01
SSRP1-203ENST00000526696 ETNPPLQ8TBG4 499 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 TCP11Q8WWU5 503 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 E2F7Q96AV8 911 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 CRELD1Q96HD1 420 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 TMEM209Q96SK2 561 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 LRRC3Q9BY71 257 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 C6orf50Q9HD87 102 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 RAXQ9Y2V3 346 aa14.96□□□□□ -0.01
SSRP1-203ENST00000526696 TNRC6BQ9UPQ9 1833 aaKnown RBP14.96□□□□□ -0.01
SSRP1-203ENST00000526696 KIAA1549LQ6ZVL6 1849 aa14.95□□□□□ -0.02
SSRP1-203ENST00000526696 TTLL13PA6NNM8 815 aa14.95□□□□□ -0.02
SSRP1-203ENST00000526696 B3GAT3O94766 335 aa14.95□□□□□ -0.02
SSRP1-203ENST00000526696 TDP2O95551 362 aa14.95□□□□□ -0.02
SSRP1-203ENST00000526696 QARSP47897 775 aaKnown RBP14.95□□□□□ -0.02
SSRP1-203ENST00000526696 USP11P51784 963 aa14.95□□□□□ -0.02
SSRP1-203ENST00000526696 CLCNKBP51801 687 aa14.95□□□□□ -0.02
SSRP1-203ENST00000526696 ARPP19P56211 112 aa14.95□□□□□ -0.02
SSRP1-203ENST00000526696 TWF1Q12792 350 aa14.95□□□□□ -0.02
SSRP1-203ENST00000526696 SLC32A1Q9H598 525 aa14.95□□□□□ -0.02
SSRP1-203ENST00000526696 SLITRK6Q9H5Y7 841 aa14.95□□□□□ -0.02
SSRP1-203ENST00000526696 PTPRQQ9UMZ3 2332 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 TBX3O15119 743 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 RNF40O75150 1001 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 RECQL4O94761 1208 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 EGFP01133 1207 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 PLA2G2AP14555 144 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 BCKDHBP21953 392 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 GBP1P32455 592 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 POU5F1BQ06416 359 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 NCBP1Q09161 790 aaKnown RBP14.94□□□□□ -0.02
SSRP1-203ENST00000526696 C19orf57Q0VDD7 668 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 SEMA3BQ13214 749 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 KARSQ15046 597 aaKnown RBP14.94□□□□□ -0.02
SSRP1-203ENST00000526696 ARHGAP29Q52LW3 1261 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 LARP1BQ659C4 914 aaKnown RBP14.94□□□□□ -0.02
SSRP1-203ENST00000526696 TMC8Q8IU68 726 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 MDM1Q8TC05 714 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 ZNF512Q96ME7 567 aaPredicted RBP14.94□□□□□ -0.02
SSRP1-203ENST00000526696 GOLGA2P5Q9HBQ8 144 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 FBRSL1Q9HCM7 1045 aaKnown RBP14.94□□□□□ -0.02
SSRP1-203ENST00000526696 ASAH2Q9NR71 780 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 EBF1Q9UH73 591 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 PPME1Q9Y570 386 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 PTPRBP23467 1997 aa14.94□□□□□ -0.02
SSRP1-203ENST00000526696 A0A1W2PRU2 124 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 OTOL1A6NHN0 477 aaPredicted RBP14.93□□□□□ -0.02
SSRP1-203ENST00000526696 H0Y626 953 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 ZBTB43O43298 467 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 ATG13O75143 517 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 TRIM16O95361 564 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 MAPK8P45983 427 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 UPP1Q16831 310 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 NAIF1Q69YI7 327 aaPredicted RBP14.93□□□□□ -0.02
SSRP1-203ENST00000526696 IQCEQ6IPM2 695 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 SYNE3Q6ZMZ3 975 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 CYP2U1Q7Z449 544 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 LURAP1LQ8IV03 231 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 EXOC8Q8IYI6 725 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 RUFY2Q8WXA3 655 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 TCEANC2Q96MN5 208 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 MTRQ99707 1265 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 GPR88Q9GZN0 384 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 CCDC86Q9H6F5 360 aaKnown RBP14.93□□□□□ -0.02
SSRP1-203ENST00000526696 SCUBE2Q9NQ36 999 aa14.93□□□□□ -0.02
SSRP1-203ENST00000526696 CYP3A7-CYP3A51PA0A087WV96 503 aa14.92□□□□□ -0.02
SSRP1-203ENST00000526696 UPK3BL1B0FP48 263 aa14.92□□□□□ -0.02
SSRP1-203ENST00000526696 UPK3BL2E5RIL1 263 aa14.92□□□□□ -0.02
SSRP1-203ENST00000526696 PRAMEF12O95522 483 aa14.92□□□□□ -0.02
SSRP1-203ENST00000526696 GLRA2P23416 452 aa14.92□□□□□ -0.02
SSRP1-203ENST00000526696 CYP3A7P24462 503 aa14.92□□□□□ -0.02
SSRP1-203ENST00000526696 GNA11P29992 359 aa14.92□□□□□ -0.02
SSRP1-203ENST00000526696 YWHABP31946 246 aaKnown RBP14.92□□□□□ -0.02
SSRP1-203ENST00000526696 ADD1P35611 737 aaKnown RBP14.92□□□□□ -0.02
SSRP1-203ENST00000526696 MRPL58Q14197 206 aaKnown RBP14.92□□□□□ -0.02
SSRP1-203ENST00000526696 MXD4Q14582 209 aaPredicted RBP14.92□□□□□ -0.02
SSRP1-203ENST00000526696 GLRA4Q5JXX5 417 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms