RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 ADSSL1Q8N142 457 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 SMG8Q8ND04 991 aaKnown RBP9.11□□□□□ -0.95
VPS13B-210ENST00000521932 RSPH1Q8WYR4 309 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 ZBTB45Q96K62 511 aaPredicted RBP9.11□□□□□ -0.95
VPS13B-210ENST00000521932 SLC9A7Q96T83 725 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 TCHPQ9BT92 498 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 EIF2AQ9BY44 585 aaKnown RBP9.11□□□□□ -0.95
VPS13B-210ENST00000521932 GBP3Q9H0R5 595 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 IKZF4Q9H2S9 585 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 KCTD10Q9H3F6 313 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 UBN1Q9NPG3 1134 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 TRAF3IP3Q9Y228 551 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 IPPQ9Y573 584 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 PCDHB7Q9Y5E2 793 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 ZMYM2Q9UBW7 1377 aa9.11□□□□□ -0.95
VPS13B-210ENST00000521932 BIN1O00499 593 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 KIAA0391O15091 583 aaKnown RBP9.1□□□□□ -0.95
VPS13B-210ENST00000521932 DGKIO75912 1065 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 LETM1O95202 739 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-210ENST00000521932 GJB5O95377 273 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 NPTXRO95502 500 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 LDHAP00338 332 aaKnown RBP9.1□□□□□ -0.95
VPS13B-210ENST00000521932 ATP2A2P16615 1042 aaKnown RBP9.1□□□□□ -0.95
VPS13B-210ENST00000521932 DEFB103AP81534 67 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 HTRA4P83105 476 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-210ENST00000521932 MYBPC2Q14324 1141 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 NFIL3Q16649 462 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 KYAT1Q16773 422 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 ZNF568Q3ZCX4 644 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 CRTC2Q53ET0 693 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-210ENST00000521932 EFHC2Q5JST6 749 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 CENPPQ6IPU0 288 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 FOXR2Q6PJQ5 311 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 ALKAL1Q6UXT8 129 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 AGMOQ6ZNB7 445 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 NELFCDQ8IXH7 590 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 SMYD4Q8IYR2 804 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-210ENST00000521932 SYCP3Q8IZU3 236 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 TPCN2Q8NHX9 752 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 GOLGA5Q8TBA6 731 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 STK32AQ8WU08 396 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 SYAP1Q96A49 352 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-210ENST00000521932 ZNF689Q96CS4 500 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-210ENST00000521932 PGBD4Q96DM1 585 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 BICD1Q96G01 975 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 DHTKD1Q96HY7 919 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-210ENST00000521932 RNPC3Q96LT9 517 aaKnown RBP9.1□□□□□ -0.95
VPS13B-210ENST00000521932 TRIM6Q9C030 488 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-210ENST00000521932 CDT1Q9H211 546 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 AGPAT3Q9NRZ7 376 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 TYW1Q9NV66 732 aaKnown RBP9.1□□□□□ -0.95
VPS13B-210ENST00000521932 MAPK8IP1Q9UQF2 711 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 GIT1Q9Y2X7 761 aa9.1□□□□□ -0.95
VPS13B-210ENST00000521932 TTC3P53804 2025 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 MICAL3Q7RTP6 2002 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-210ENST00000521932 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-210ENST00000521932 TISP43B9A030 160 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 OGTO15294 1046 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 INPPL1O15357 1258 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 OFD1O75665 1012 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 ADRB2P07550 413 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 ITGA4P13612 1032 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 NLRP12P59046 1061 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 CTBSQ01459 385 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 STIM1Q13586 685 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 NOLC1Q14978 699 aaKnown RBP eCLIP9.09□□□□□ -0.95
VPS13B-210ENST00000521932 LRIT3Q3SXY7 679 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 ZCWPW2Q504Y3 356 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 XKR4Q5GH76 650 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 CT47A1Q5JQC4 288 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-210ENST00000521932 SH3PXD2AQ5TCZ1 1133 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 CAVIN1Q6NZI2 390 aaKnown RBP9.09□□□□□ -0.95
VPS13B-210ENST00000521932 ARMCX5Q6P1M9 558 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 HS2ST1Q7LGA3 356 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 SLC9A9Q8IVB4 645 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 HERC6Q8IVU3 1022 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 HACE1Q8IYU2 909 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 CEP120Q8N960 986 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 MLKLQ8NB16 471 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 C1orf216Q8TAB5 229 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 POMGNT1Q8WZA1 660 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 CASD1Q96PB1 797 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 MSTO1Q9BUK6 570 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 ZCCHC2Q9C0B9 1178 aaKnown RBP9.09□□□□□ -0.95
VPS13B-210ENST00000521932 SEMA6BQ9H3T3 888 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 NXF3Q9H4D5 531 aaKnown RBP9.09□□□□□ -0.95
VPS13B-210ENST00000521932 RC3H2Q9HBD1 1191 aaKnown RBP9.09□□□□□ -0.95
VPS13B-210ENST00000521932 RNF19AQ9NV58 838 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 DMAC2Q9NW81 257 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 SNTG2Q9NY99 539 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 ANKFY1Q9P2R3 1169 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 CPSF3Q9UKF6 684 aaKnown RBP9.09□□□□□ -0.95
VPS13B-210ENST00000521932 AGO2Q9UKV8 859 aaKnown RBP9.09□□□□□ -0.95
VPS13B-210ENST00000521932 LRFN2Q9ULH4 789 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 ATXN7L1Q9ULK2 861 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-210ENST00000521932 HES2Q9Y543 173 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 INSL6Q9Y581 213 aa9.09□□□□□ -0.95
VPS13B-210ENST00000521932 A0A1W2PNR3 127 aa9.08□□□□□ -0.96
VPS13B-210ENST00000521932 MEIS3P2A8K0S8 358 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms