RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 TAF11Q15544 211 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 NTRK3Q16288 839 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 PKN1Q16512 942 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 GJC2Q5T442 439 aaPredicted RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 MAP3K21Q5TCX8 1036 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 LMBRD2Q68DH5 695 aaPredicted RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 CXorf57Q6NSI4 855 aaKnown RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 SHISA2Q6UWI4 295 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 MAMDC4Q6UXC1 1216 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 EPM2AIP1Q7L775 607 aaPredicted RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 OTOP3Q7RTS5 596 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 FAM178BQ8IXR5 827 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 CHCHD4Q8N4Q1 142 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 NKAPQ8N5F7 415 aaKnown RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 ZNF713Q8N859 430 aaPredicted RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 FAM184AQ8NB25 1140 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 ARRDC4Q8NCT1 418 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 GALNT11Q8NCW6 608 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 CCDC148Q8NFR7 591 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 BICD2Q8TD16 824 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 SNRNP27Q8WVK2 155 aaKnown RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 LENG1Q96BZ8 264 aaPredicted RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 PGBD1Q96JS3 809 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 FGD4Q96M96 766 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 AIFM3Q96NN9 605 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 TM9SF2Q99805 663 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 ALG1Q9BT22 464 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 NAA15Q9BXJ9 866 aaKnown RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 WDR11Q9BZH6 1224 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 AP5M1Q9H0R1 490 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 GLT8D2Q9H1C3 349 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 ABHD16BQ9H3Z7 469 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 LUC7LQ9NQ29 371 aaKnown RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 XPNPEP3Q9NQH7 507 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 PAK6Q9NQU5 681 aaPredicted RBP3.08□□□□□ -1.92
SKP1-204ENST00000517691 PDGFCQ9NRA1 345 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 COL20A1Q9P218 1284 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 REV1Q9UBZ9 1251 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 PCDHA6Q9UN73 950 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 KCNJ14Q9UNX9 436 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 SH3BP1Q9Y3L3 701 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 PCDHGC5Q9Y5F6 944 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 PCDHA8Q9Y5H6 950 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 ASTN1O14525 1302 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 MYH8P13535 1937 aa3.08□□□□□ -1.92
SKP1-204ENST00000517691 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 DCDC2CA8MYV0 355 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 KBTBD13C9JR72 458 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 DDX3YO15523 660 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 CBFA2T2O43439 604 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 ADAM11O75078 769 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 PGK1P00558 417 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 RPN1P04843 607 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 C6orf222P0C671 652 aaPredicted RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 TXNP10599 105 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 PF4V1P10720 104 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 NCAM1P13591 858 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 GLULP15104 373 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 NME1P15531 152 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 ALAS2P22557 587 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 GUCY2CP25092 1073 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 GUCY1B3Q02153 619 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 TTLL4Q14679 1199 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 PGM5Q15124 567 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 ELF2Q15723 593 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 SEPT7Q16181 437 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 LY6KQ17RY6 165 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 GNPTABQ3T906 1256 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 MINDY4Q4G0A6 757 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 ARHGAP29Q52LW3 1261 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 ZC3H12AQ5D1E8 599 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 FAM209AQ5JX71 171 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 WDR45BQ5MNZ6 344 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 TMEM201Q5SNT2 666 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 CDCP2Q5VXM1 449 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 RNF219Q5W0B1 726 aaPredicted RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 IQSEC1Q6DN90 963 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 OVOS1Q6IE37 1185 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 TAPT1Q6NXT6 567 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 PKN3Q6P5Z2 889 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 UNC5AQ6ZN44 842 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 C1orf122Q6ZSJ8 110 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 HDXQ7Z353 690 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 NLRX1Q86UT6 975 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 VSIG10LQ86VR7 867 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 C12orf40Q86WS4 652 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 BLIDQ8IZY5 108 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 TAB3Q8N5C8 712 aaPredicted RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 NSUN7Q8NE18 718 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 DDX1Q92499 740 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 KISS1RQ969F8 398 aaPredicted RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 FERMT2Q96AC1 680 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 TMX3Q96JJ7 454 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 SLC9A7Q96T83 725 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 MYCBPQ99417 103 aaPredicted RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 CORO1BQ9BR76 489 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 PDCD2LQ9BRP1 358 aa3.07□□□□□ -1.92
SKP1-204ENST00000517691 LLPHQ9BRT6 129 aaKnown RBP3.07□□□□□ -1.92
SKP1-204ENST00000517691 DHRS4Q9BTZ2 278 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms