RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 AFPP02771 609 aaKnown RBP10.67□□□□□ -0.7
CLN8-202ENST00000517514 TMEM191BP0C7N4 346 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 DNAJB2P25686 324 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 POLR2BP30876 1174 aaKnown RBP10.67□□□□□ -0.7
CLN8-202ENST00000517514 GTF2H1P32780 548 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 RPL9P32969 192 aaKnown RBP10.67□□□□□ -0.7
CLN8-202ENST00000517514 MTIF2P46199 727 aaKnown RBP10.67□□□□□ -0.7
CLN8-202ENST00000517514 BRCC3P46736 316 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 COPB1P53618 953 aaKnown RBP10.67□□□□□ -0.7
CLN8-202ENST00000517514 MYL6P60660 151 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 ERVK-21P61565 698 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 RNASELQ05823 741 aaKnown RBP10.67□□□□□ -0.7
CLN8-202ENST00000517514 KCNMA1Q12791 1236 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 HSP90AA2PQ14568 343 aaPredicted RBP10.67□□□□□ -0.7
CLN8-202ENST00000517514 MAN2A1Q16706 1144 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 VWA3BQ502W6 1294 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 EPC2Q52LR7 807 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 TCERG1LQ5VWI1 586 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 TAS1R1Q7RTX1 841 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 RNF168Q8IYW5 571 aaPredicted RBP10.67□□□□□ -0.7
CLN8-202ENST00000517514 ANKRD36BP1Q96IX9 119 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 VPS16Q9H269 839 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 MMRN2Q9H8L6 949 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 APOBEC3GQ9HC16 384 aaKnown RBP10.67□□□□□ -0.7
CLN8-202ENST00000517514 SLC38A7Q9NVC3 462 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 ITGA11Q9UKX5 1188 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 AGAP1Q9UPQ3 857 aa10.67□□□□□ -0.7
CLN8-202ENST00000517514 PRG3Q9Y2Y8 225 aaPredicted RBP10.67□□□□□ -0.7
CLN8-202ENST00000517514 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLN8-202ENST00000517514 BECN2A8MW95 431 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 C5orf67F2Z3F1 127 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 I3L4J1 428 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 TULP1O00294 542 aaPredicted RBP10.66□□□□□ -0.7
CLN8-202ENST00000517514 TEX33O43247 280 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 TNNC2P02585 160 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 ALDH2P05091 517 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 LAG3P18627 525 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 DNAJB1P25685 340 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 BMPR1AP36894 532 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 OR1G1P47890 313 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 MXI1P50539 228 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 AP3M2P53677 418 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 LILRA4P59901 499 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 APBA1Q02410 837 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 RAB30Q15771 203 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 PTPN21Q16825 1174 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 TIGD5Q53EQ6 642 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 KRT39Q6A163 491 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 SPOPLQ6IQ16 392 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 DCLRE1AQ6PJP8 1040 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 LIMS2Q7Z4I7 341 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 CREBRFQ8IUR6 639 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 FAM114A1Q8IWE2 563 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 HASPINQ8TF76 798 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 CACTINQ8WUQ7 758 aaKnown RBP10.66□□□□□ -0.7
CLN8-202ENST00000517514 IGSF21Q96ID5 467 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 UROC1Q96N76 676 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 ZNF558Q96NG5 402 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 FAM193BQ96PV7 902 aaPredicted RBP10.66□□□□□ -0.7
CLN8-202ENST00000517514 PI4K2AQ9BTU6 479 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 GPR62Q9BZJ7 368 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 NDST4Q9H3R1 872 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 FAN1Q9Y2M0 1017 aa10.66□□□□□ -0.7
CLN8-202ENST00000517514 A0A1B0GTH6 734 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 LGALS16A8MUM7 142 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 XPOTO43592 962 aaKnown RBP10.65□□□□□ -0.7
CLN8-202ENST00000517514 STAU1O95793 577 aaKnown RBP10.65□□□□□ -0.7
CLN8-202ENST00000517514 ASS1P00966 412 aaKnown RBP10.65□□□□□ -0.7
CLN8-202ENST00000517514 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.7
CLN8-202ENST00000517514 RBP5P82980 135 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 FANCCQ00597 558 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 MYL7Q01449 175 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 NCOA4Q13772 614 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 CAMK1Q14012 370 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 LRRC52Q8N7C0 313 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 KLHL23Q8NBE8 558 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 TATDN2Q93075 761 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 DDX27Q96GQ7 796 aaKnown RBP10.65□□□□□ -0.7
CLN8-202ENST00000517514 SDCBP2Q9H190 292 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 TTYH1Q9H313 450 aaPredicted RBP10.65□□□□□ -0.7
CLN8-202ENST00000517514 VRTNQ9H8Y1 702 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 CERS4Q9HA82 394 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 SIX2Q9NPC8 291 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 RTN4Q9NQC3 1192 aaKnown RBP10.65□□□□□ -0.7
CLN8-202ENST00000517514 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.65□□□□□ -0.7
CLN8-202ENST00000517514 MAGEC2Q9UBF1 373 aaPredicted RBP10.65□□□□□ -0.7
CLN8-202ENST00000517514 AJAP1Q9UKB5 411 aaPredicted RBP10.65□□□□□ -0.7
CLN8-202ENST00000517514 ADAM28Q9UKQ2 775 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 POLIQ9UNA4 740 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 NUB1Q9Y5A7 615 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 NME7Q9Y5B8 376 aa10.65□□□□□ -0.7
CLN8-202ENST00000517514 M0QZQ0 153 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 RFXAPO00287 272 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 P4HA2O15460 535 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 LPXNO60711 386 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 FGF18O76093 207 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 B3GAT3O94766 335 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 KRT19P08727 400 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 SLC9A1P19634 815 aa10.64□□□□□ -0.71
CLN8-202ENST00000517514 PON1P27169 355 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms