RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 RBBP5Q15291 538 aaKnown RBP4.98□□□□□ -1.61
NIPBL-206ENST00000509429 OASLQ15646 514 aaKnown RBP4.98□□□□□ -1.61
NIPBL-206ENST00000509429 INAQ16352 499 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 SH2D4BQ5SQS7 431 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 TATDN1Q6P1N9 297 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 BRINP3Q76B58 766 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 CCDC186Q7Z3E2 898 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 LRP10Q7Z4F1 713 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 FAM114A1Q8IWE2 563 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 NAXEQ8NCW5 288 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 CCDC148Q8NFR7 591 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 FBXO27Q8NI29 283 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 SCARB1Q8WTV0 552 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 SGCDQ92629 289 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 DPF3Q92784 378 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 GJA10Q969M2 543 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 CCDC114Q96M63 670 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 SARGQ9BW04 601 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 ZNF408Q9H9D4 720 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 TMEM165Q9HC07 324 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 GP6Q9HCN6 339 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 INCENPQ9NQS7 918 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 TBC1D22BQ9NU19 505 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 OBP2AQ9NY56 170 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 POGKQ9P215 609 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 SUCOQ9UBS9 1254 aaKnown RBP4.98□□□□□ -1.61
NIPBL-206ENST00000509429 GIMAP2Q9UG22 337 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 NOB1Q9ULX3 412 aaKnown RBP4.98□□□□□ -1.61
NIPBL-206ENST00000509429 AGTPBP1Q9UPW5 1226 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 MTF2Q9Y483 593 aaPredicted RBP4.98□□□□□ -1.61
NIPBL-206ENST00000509429 JRKLQ9Y4A0 524 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 ANGPTL3Q9Y5C1 460 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 COX11Q9Y6N1 276 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 THOC2Q8NI27 1593 aaKnown RBP4.98□□□□□ -1.61
NIPBL-206ENST00000509429 CTTNBP2Q8WZ74 1663 aa4.98□□□□□ -1.61
NIPBL-206ENST00000509429 SPAG9O60271 1321 aaKnown RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 PCF11O94913 1555 aaKnown RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 CFTRP13569 1480 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 NCAPD3P42695 1498 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 FYCO1Q9BQS8 1478 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 ARHGAP35Q9NRY4 1499 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 C7orf72A4D263 438 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 LRRC72A6NJI9 287 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 LACTBL1A8MY62 500 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 HOXC11O43248 304 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 ZBTB14O43829 449 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 GFPT2O94808 682 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 IL33O95760 270 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 LDHBP07195 334 aaKnown RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 PCP11498 1178 aaKnown RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 XPAP23025 273 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 ATP5DP30049 168 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 GNA15P30679 374 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 HSD17B2P37059 387 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 TM4SF4P48230 202 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 CTCFP49711 727 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 GTF2A2P52657 109 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 ADCY1Q08828 1119 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 GRIK3Q13003 919 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 IKQ13123 557 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 SQSTM1Q13501 440 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 SEMA3AQ14563 771 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 RCN1Q15293 331 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 PPP1R7Q15435 360 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 SETMARQ53H47 684 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 FKBP15Q5T1M5 1219 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 HECTD3Q5T447 861 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 MEI1Q5TIA1 1274 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 KAZNQ674X7 775 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 TRIM68Q6AZZ1 485 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 CAPRIN2Q6IMN6 1127 aaKnown RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 FASTKD5Q7L8L6 764 aaKnown RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 ARMC9Q7Z3E5 817 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 RSPH3Q86UC2 560 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 NLRP10Q86W26 655 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 IQCA1Q86XH1 822 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 TBC1D21Q8IYX1 336 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 NAT8LQ8N9F0 302 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 OTUD7AQ8TE49 926 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 TIFAQ96CG3 184 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 NRBF2Q96F24 287 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 THOC1Q96FV9 657 aaKnown RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 CNDP2Q96KP4 475 aaKnown RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 RHOVQ96L33 236 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 C7orf25Q9BPX7 421 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 OSBPL10Q9BXB5 764 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 TRIM55Q9BYV6 548 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 VCPKMTQ9H867 229 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 NKIRAS2Q9NYR9 191 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 GPRC5BQ9NZH0 403 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 OGFRQ9NZT2 677 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 NFKBIL1Q9UBC1 381 aaPredicted RBP4.97□□□□□ -1.61
NIPBL-206ENST00000509429 PFDN2Q9UHV9 154 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 MCM8Q9UJA3 840 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 CCPG1Q9ULG6 757 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 ATP11BQ9Y2G3 1177 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 MAPKBP1O60336 1514 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 GAKO14976 1311 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 ITIH6Q6UXX5 1313 aa4.97□□□□□ -1.61
NIPBL-206ENST00000509429 DHX29Q7Z478 1369 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms