RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 CCDC195A0A1B0GUA6 201 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 CFAP69A5D8W1 941 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 GOLGA8IPA6NC78 632 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 GOLGA8JA6NMD2 632 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 PPFIA4O75335 1185 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 DLGAP3O95886 979 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 APODP05090 189 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 LCP1P13796 627 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 CPA1P15085 419 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 MLH1P40692 756 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 HARS2P49590 506 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 CACNB1Q02641 598 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 RIPPLY1Q0D2K3 151 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 RBBP5Q15291 538 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF699Q32M78 642 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 SWT1Q5T5J6 900 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 DENND2CQ68D51 928 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 RWDD4Q6NW29 188 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 ABRAXAS1Q6UWZ7 409 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 SETD7Q8WTS6 366 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 POF1BQ8WVV4 589 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 PARVGQ9HBI0 331 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 CASS4Q9NQ75 786 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 GIT1Q9Y2X7 761 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 PCDHB6Q9Y5E3 794 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 GRXCR1A8MXD5 290 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 NT5C1B-RDH14C9J2C7 533 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 TACC1O75410 805 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 TCEA3O75764 348 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 IL18RAPO95256 599 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 IQCF3P0C7M6 154 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 USP11P51784 963 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 CLCN3P51790 818 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 PTPN5P54829 565 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 PFKPQ01813 784 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 LAMTOR4Q0VGL1 99 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 PTPN14Q15678 1187 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 VWA3BQ502W6 1294 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 NOSTRINQ8IVI9 506 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 ARHGAP18Q8N392 663 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 CCDC26Q8TAB7 109 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 SYTL5Q8TDW5 730 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 ATP6V1E2Q96A05 226 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 KXD1Q9BQD3 176 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 SEMA6BQ9H3T3 888 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 STN1Q9H668 368 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 SFXN1Q9H9B4 322 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 A1CFQ9NQ94 594 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 GTF2IRD1Q9UHL9 959 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 KLF15Q9UIH9 416 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 TPX2Q9ULW0 747 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 NOVA2Q9UNW9 492 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 ADAMTS7Q9UKP4 1686 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 BAZ2BQ9UIF8 2168 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 TMEM238LA0A1B0GVL6 79 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 TREHO43280 583 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 XRCC5P13010 732 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 CD53P19397 219 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 MTHFRP42898 656 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 TRPC1P48995 793 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 CDR2Q01850 454 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 YWHAHQ04917 246 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 RESTQ13127 1097 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 HADHQ16836 314 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 DUSP28Q4G0W2 176 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 SDCCAG8Q86SQ7 713 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 SIX5Q8N196 739 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 MS4A4AQ96JQ5 239 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 TRIM56Q9BRZ2 755 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 ABCF3Q9NUQ8 709 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 DPP3Q9NY33 737 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 KLHL42Q9P2K6 505 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 PCSK1NQ9UHG2 260 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 FBXO9Q9UK97 447 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 Q9Y3F1 56 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 PCDHB15Q9Y5E8 787 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 IGSF9BQ9UPX0 1349 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 DAB1O75553 588 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 FGF18O76093 207 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 MYOGP15173 224 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 MAPK8P45983 427 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF165P49910 485 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 IRX4P78413 519 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 ELAVL2Q12926 359 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 NAA30Q147X3 362 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 BMP2KLQ5H9B9 411 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 GLRA4Q5JXX5 417 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 C10orf120Q5SQS8 335 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 TMTC3Q6ZXV5 915 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 CARNMT1Q8N4J0 409 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 NAP1L3Q99457 506 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 OMDQ99983 421 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 LLPHQ9BRT6 129 aaKnown RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 FAM213AQ9BRX8 229 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 ALDH8A1Q9H2A2 487 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 R3HDMLQ9H3Y0 253 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 KIAA1522Q9P206 1035 aaPredicted RBP3.14□□□□□ -1.91
NEDD4-208ENST00000508342 TJP2Q9UDY2 1190 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 PCDHB2Q9Y5E7 798 aa3.14□□□□□ -1.91
NEDD4-208ENST00000508342 ZNF521Q96K83 1311 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms