RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 PLEKHA4Q9H4M7 779 aa8.72□□□□□ -1.01
UBE2D3-222ENST00000508238 KMT5AQ9NQR1 393 aa8.72□□□□□ -1.01
UBE2D3-222ENST00000508238 CDH22Q9UJ99 828 aa8.72□□□□□ -1.01
UBE2D3-222ENST00000508238 DOLKQ9UPQ8 538 aa8.72□□□□□ -1.01
UBE2D3-222ENST00000508238 MORC2Q9Y6X9 1032 aaPredicted RBP8.72□□□□□ -1.01
UBE2D3-222ENST00000508238 SF3B1O75533 1304 aaKnown RBP eCLIP8.72□□□□□ -1.012e-6■■■■■ 50.5
UBE2D3-222ENST00000508238 ZFHX2Q9C0A1 2572 aaPredicted RBP8.71□□□□□ -1.01
UBE2D3-222ENST00000508238 SMIM28A0A1B0GU29 152 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 TMEM221A6NGB7 291 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 SFI1A8K8P3 1242 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 C2CD4DB7Z1M9 353 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 H0YCG3 227 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 J3QL48 77 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 M0R296 226 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 C2CD2LO14523 706 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 SLC16A4O15374 487 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 TOM1L1O75674 476 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 MAPTP10636 758 aaKnown RBP8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 KCNE1P15382 129 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 LIG1P18858 919 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 PLA2G5P39877 138 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 ZNF131P52739 623 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 SIGLEC14Q08ET2 396 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 ZRSR1Q15695 479 aaKnown RBP8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 UPP1Q16831 310 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 KANK3Q6NY19 840 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 PDXDC1Q6P996 788 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 MPZL3Q6UWV2 235 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 CD300LGQ6UXG3 332 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 TMC5Q6UXY8 1006 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 HFE2Q6ZVN8 426 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 OTOP3Q7RTS5 596 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 UBALD2Q8IYN6 164 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 LNX1Q8TBB1 728 aaPredicted RBP8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 RIN2Q8WYP3 895 aaPredicted RBP8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 CALML4Q96GE6 196 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 CDK5RAP3Q96JB5 506 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 UROC1Q96N76 676 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 TTPALQ9BTX7 342 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 CCDC94Q9BW85 323 aaPredicted RBP8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 TARS2Q9BW92 718 aaKnown RBP8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 CCSER1Q9C0I3 900 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 CDT1Q9H211 546 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 TOPORSQ9NS56 1045 aaPredicted RBP8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 BLOC1S4Q9NUP1 217 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 SLC38A7Q9NVC3 462 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 LARSQ9P2J5 1176 aaKnown RBP8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 ODF2LQ9ULJ1 636 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 GDAQ9Y2T3 454 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 WASF2Q9Y6W5 498 aa8.71□□□□□ -1.02
UBE2D3-222ENST00000508238 PLXNA3P51805 1871 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 DENND4AQ7Z401 1863 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 CCDC195A0A1B0GUA6 201 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 CASTOR2A6NHX0 329 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 TGM5O43548 720 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 B3GAT3O94766 335 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 KIF4AO95239 1232 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 WEE2P0C1S8 567 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 SYT1P21579 422 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 FGFR3P22607 806 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 RPL9P32969 192 aaKnown RBP8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 DDIT3P35638 169 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 YARSP54577 528 aaKnown RBP8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 NCKAP1LP55160 1127 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 STRN3Q13033 797 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 NCOA4Q13772 614 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 PTPAQ15257 358 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 SF3A1Q15459 793 aaKnown RBP8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 ZNF568Q3ZCX4 644 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 OXLD1Q5BKU9 147 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 RTP2Q5QGT7 225 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 FAM171A1Q5VUB5 890 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 CCDC149Q6ZUS6 474 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 RTL10Q7L3V2 364 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 TDRD5Q8NAT2 981 aaKnown RBP8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 RABGGTAQ92696 567 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 ZNF707Q96C28 371 aaPredicted RBP8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 ASIC4Q96FT7 647 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 B3GALT6Q96L58 329 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 ACAP3Q96P50 834 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 PLIN2Q99541 437 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 CLSTN3Q9BQT9 956 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 TCHPQ9BT92 498 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 PLEKHA5Q9HAU0 1116 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 WDR6Q9NNW5 1121 aaKnown RBP8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 MAN1C1Q9NR34 630 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 ZDHHC7Q9NXF8 308 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 TOR4AQ9NXH8 423 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 CNTN3Q9P232 1028 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 CACNG4Q9UBN1 327 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 SORCS3Q9UPU3 1222 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 GVINP1Q7Z2Y8 2422 aa8.7□□□□□ -1.02
UBE2D3-222ENST00000508238 CACNA1IQ9P0X4 2223 aa8.69□□□□□ -1.02
UBE2D3-222ENST00000508238 WDFY4Q6ZS81 3184 aa8.69□□□□□ -1.02
UBE2D3-222ENST00000508238 CLDN3O15551 220 aa8.69□□□□□ -1.02
UBE2D3-222ENST00000508238 MEFVO15553 781 aaPredicted RBP8.69□□□□□ -1.02
UBE2D3-222ENST00000508238 TRAPPC3O43617 180 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms