RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 SUSD3Q96L08 255 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 FAM213AQ9BRX8 229 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 SERTAD1Q9UHV2 236 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 MUTYHQ9UIF7 546 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 FBXW11Q9UKB1 542 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 DERAQ9Y315 318 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 C2CD2Q9Y426 696 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 BACE2Q9Y5Z0 518 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 CDY1Q9Y6F8 540 aa16.87■□□□□ 0.29
MED28-204ENST00000506409 EIF3DO15371 548 aaKnown RBP eCLIP16.86■□□□□ 0.29
MED28-204ENST00000506409 ACTN4O43707 911 aaKnown RBP16.86■□□□□ 0.29
MED28-204ENST00000506409 CUL4BQ13620 913 aa16.86■□□□□ 0.29
MED28-204ENST00000506409 RAB33AQ14088 237 aa16.86■□□□□ 0.29
MED28-204ENST00000506409 LIN9Q5TKA1 542 aa16.86■□□□□ 0.29
MED28-204ENST00000506409 RSPO2Q6UXX9 243 aaPredicted RBP16.86■□□□□ 0.29
MED28-204ENST00000506409 CYP26C1Q6V0L0 522 aa16.86■□□□□ 0.29
MED28-204ENST00000506409 CCDC149Q6ZUS6 474 aa16.86■□□□□ 0.29
MED28-204ENST00000506409 GRAMD1CQ8IYS0 662 aa16.86■□□□□ 0.29
MED28-204ENST00000506409 APPL2Q8NEU8 664 aa16.86■□□□□ 0.29
MED28-204ENST00000506409 CBWD1Q9BRT8 395 aa16.86■□□□□ 0.29
MED28-204ENST00000506409 ZDHHC7Q9NXF8 308 aa16.86■□□□□ 0.29
MED28-204ENST00000506409 HPSEQ9Y251 543 aa16.86■□□□□ 0.29
MED28-204ENST00000506409 PVALEFA0A1B0GWK0 134 aa16.85■□□□□ 0.29
MED28-204ENST00000506409 H7C4K7 107 aa16.85■□□□□ 0.29
MED28-204ENST00000506409 TULP1O00294 542 aaPredicted RBP16.85■□□□□ 0.29
MED28-204ENST00000506409 ZMYND10O75800 440 aa16.85■□□□□ 0.29
MED28-204ENST00000506409 IL18RAPO95256 599 aa16.85■□□□□ 0.29
MED28-204ENST00000506409 LDHAP00338 332 aaKnown RBP16.85■□□□□ 0.29
MED28-204ENST00000506409 NUCB2P80303 420 aa16.85■□□□□ 0.29
MED28-204ENST00000506409 EHHADHQ08426 723 aa16.85■□□□□ 0.29
MED28-204ENST00000506409 ARMCX5Q6P1M9 558 aa16.85■□□□□ 0.29
MED28-204ENST00000506409 TDRD5Q8NAT2 981 aaKnown RBP16.85■□□□□ 0.29
MED28-204ENST00000506409 NOC3LQ8WTT2 800 aaKnown RBP16.85■□□□□ 0.29
MED28-204ENST00000506409 SMG7Q92540 1137 aaKnown RBP16.85■□□□□ 0.29
MED28-204ENST00000506409 PAGE5Q96GU1 130 aa16.85■□□□□ 0.29
MED28-204ENST00000506409 RHOBTB2Q9BYZ6 727 aa16.85■□□□□ 0.29
MED28-204ENST00000506409 PIDD1Q9HB75 910 aa16.85■□□□□ 0.29
MED28-204ENST00000506409 USP25Q9UHP3 1055 aa16.85■□□□□ 0.29
MED28-204ENST00000506409 PCDHB8Q9UN66 801 aa16.85■□□□□ 0.29
MED28-204ENST00000506409 TCHHQ07283 1943 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 MTCL1Q9Y4B5 1905 aaKnown RBP16.84■□□□□ 0.29
MED28-204ENST00000506409 GOLGA8IPA6NC78 632 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 GOLGA8JA6NMD2 632 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 C2CD4DB7Z1M9 353 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 M0QZQ0 153 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 EXTL3O43909 919 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 C8AP07357 584 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 SYKP43405 635 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 AARSP49588 968 aaKnown RBP eCLIP16.84■□□□□ 0.29
MED28-204ENST00000506409 C9orf57Q5W0N0 161 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 SLC8B1Q6J4K2 584 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 ZNF280DQ6N043 979 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 EPM2AIP1Q7L775 607 aaPredicted RBP16.84■□□□□ 0.29
MED28-204ENST00000506409 BRSK2Q8IWQ3 736 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 ZSWIM2Q8NEG5 633 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 ZNF507Q8TCN5 953 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 ZNF707Q96C28 371 aaPredicted RBP16.84■□□□□ 0.29
MED28-204ENST00000506409 PRKD2Q9BZL6 878 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 PCIF1Q9H4Z3 704 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 GDPD2Q9HCC8 539 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 RBAKQ9NYW8 714 aaPredicted RBP16.84■□□□□ 0.29
MED28-204ENST00000506409 USTQ9Y2C2 406 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 ANK1P16157 1881 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 C2orf16Q68DN1 1984 aa16.84■□□□□ 0.29
MED28-204ENST00000506409 A0A1W2PQ27 194 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 A0A1W2PQ64 194 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 A0A1W2PQD8 194 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 PPEF2O14830 753 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 KIAA0391O15091 583 aaKnown RBP16.83■□□□□ 0.28
MED28-204ENST00000506409 UBE4BO95155 1302 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 PAPLNO95428 1278 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 HOXD13P35453 343 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 NDUFA8P51970 172 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 ARPP19P56211 112 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 ROR1Q01973 937 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 MRPL58Q14197 206 aaKnown RBP16.83■□□□□ 0.28
MED28-204ENST00000506409 CTXN3Q4LDR2 81 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 TMEM31Q5JXX7 168 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 PPM1LQ5SGD2 360 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 DSTYKQ6XUX3 929 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 OTOP3Q7RTS5 596 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 DENND4AQ7Z401 1863 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 NT5DC4Q86YG4 428 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 EFCAB13Q8IY85 973 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 GPD1LQ8N335 351 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 FSIP1Q8NA03 581 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 SLC7A14Q8TBB6 771 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 SCFD1Q8WVM8 642 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 ACSF2Q96CM8 615 aaPredicted RBP16.83■□□□□ 0.28
MED28-204ENST00000506409 WDR6Q9NNW5 1121 aaKnown RBP16.83■□□□□ 0.28
MED28-204ENST00000506409 SLC39A2Q9NP94 309 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 DPP3Q9NY33 737 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 FBXL5Q9UKA1 691 aa16.83■□□□□ 0.28
MED28-204ENST00000506409 CLUHO75153 1309 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 FAM237AA0A1B0GTK4 181 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 ANO9A1A5B4 782 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 FAM86C2PA6NEL3 165 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 PIRO00625 290 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 TBC1D4O60343 1298 aa16.82■□□□□ 0.28
MED28-204ENST00000506409 HNRNPA1P09651 372 aaKnown RBP eCLIP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms