RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 KCNK12Q9HB15 430 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 SLC38A7Q9NVC3 462 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 TIMM13Q9Y5L4 95 aaPredicted RBP18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 BACE2Q9Y5Z0 518 aa18.23■□□□□ 0.51
PDLIM7-215ENST00000506161 PRR23AA6NEV1 266 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 SPTLC1O15269 473 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 GALR2O43603 387 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 VNN2O95498 520 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 LRPAP1P30533 357 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 CREMQ03060 361 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 MTMR3Q13615 1198 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 AXDND1Q5T1B0 1012 aaPredicted RBP18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 JADE1Q6IE81 842 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 SHC4Q6S5L8 630 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 OTOP3Q7RTS5 596 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 ITFG1Q8TB96 612 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 HPS3Q969F9 1004 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 RPP25Q9BUL9 199 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 ST6GALNAC4Q9H4F1 302 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 PIDD1Q9HB75 910 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 DNMT3BQ9UBC3 853 aaKnown RBP18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 CCDC39Q9UFE4 941 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 FBXL5Q9UKA1 691 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 STYXL1Q9Y6J8 313 aa18.22■□□□□ 0.51
PDLIM7-215ENST00000506161 FRMD3A2A2Y4 597 aa18.21■□□□□ 0.51
PDLIM7-215ENST00000506161 H0YCG3 227 aa18.21■□□□□ 0.51
PDLIM7-215ENST00000506161 RPL9P32969 192 aaKnown RBP18.21■□□□□ 0.51
PDLIM7-215ENST00000506161 MCM4P33991 863 aa18.21■□□□□ 0.51
PDLIM7-215ENST00000506161 ID4P47928 161 aa18.21■□□□□ 0.51
PDLIM7-215ENST00000506161 STK38Q15208 465 aa18.21■□□□□ 0.51
PDLIM7-215ENST00000506161 PPM1LQ5SGD2 360 aa18.21■□□□□ 0.51
PDLIM7-215ENST00000506161 SLC8B1Q6J4K2 584 aa18.21■□□□□ 0.51
PDLIM7-215ENST00000506161 PLCD3Q8N3E9 789 aa18.21■□□□□ 0.51
PDLIM7-215ENST00000506161 MSTO1Q9BUK6 570 aa18.21■□□□□ 0.51
PDLIM7-215ENST00000506161 EPS15L1Q9UBC2 864 aa18.21■□□□□ 0.51
PDLIM7-215ENST00000506161 KCNG1Q9UIX4 513 aa18.21■□□□□ 0.51
PDLIM7-215ENST00000506161 SPTBN4Q9H254 2564 aa18.21■□□□□ 0.51
PDLIM7-215ENST00000506161 PTPRZ1P23471 2315 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 SPTLC2O15270 562 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 ABLIM3O94929 683 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 F13A1P00488 732 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 OR4Q2P0C623 313 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 NBL1P41271 181 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 STAT6P42226 847 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 AARSP49588 968 aaKnown RBP eCLIP18.2■□□□□ 0.54e-9■■□□□ 11.9
PDLIM7-215ENST00000506161 ARPP19P56211 112 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 PPP2R3AQ06190 1150 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 SLC5A9Q2M3M2 681 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 CYP26C1Q6V0L0 522 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 ANKS3Q6ZW76 656 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 SV2BQ7L1I2 683 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 EFCAB13Q8IY85 973 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 ACSF2Q96CM8 615 aaPredicted RBP18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 FAM212AQ96EL1 285 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 RPF1Q9H9Y2 349 aaKnown RBP18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 PLEKHA5Q9HAU0 1116 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 NUB1Q9Y5A7 615 aa18.2■□□□□ 0.5
PDLIM7-215ENST00000506161 SYN3O14994 580 aa18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 ZSCAN22P10073 491 aaPredicted RBP18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 LAMP2P13473 410 aa18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 NPR3P17342 541 aa18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 CASP1P29466 404 aa18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 CDR1P51861 262 aa18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 LIN9Q5TKA1 542 aa18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 SPATA1Q5VX52 437 aa18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 CWF19L1Q69YN2 538 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 HSCBQ8IWL3 235 aa18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 TMEM105Q8N8V8 129 aa18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 TMEM209Q96SK2 561 aa18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 CRISPLD1Q9H336 500 aa18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 MYO15AQ9UKN7 3530 aa18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 UBQLN1Q9UMX0 589 aaKnown RBP18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 POLIQ9UNA4 740 aa18.19■□□□□ 0.5
PDLIM7-215ENST00000506161 COL4A2P08572 1712 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 M0QZQ0 153 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 TRAPPC3O43617 180 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 HNRNPA1P09651 372 aaKnown RBP eCLIP18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 IDEP14735 1019 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 FSHRP23945 695 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 HOXA9P31269 272 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 HOXD13P35453 343 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 TDGQ13569 410 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 HTR4Q13639 388 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 CTXN3Q4LDR2 81 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 ADALQ6DHV7 355 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 PDXDC1Q6P996 788 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 UBALD2Q8IYN6 164 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 SLC44A3Q8N4M1 653 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 ING5Q8WYH8 240 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 FGF14Q92915 247 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 MRPL44Q9H9J2 332 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 DAXXQ9UER7 740 aaPredicted RBP18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 DPP7Q9UHL4 492 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 AGO2Q9UKV8 859 aaKnown RBP18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 PCDHB8Q9UN66 801 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 DUSP12Q9UNI6 340 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 ZDHHC9Q9Y397 364 aa18.18■□□□□ 0.5
PDLIM7-215ENST00000506161 ANO9A1A5B4 782 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 ANHXE9PGG2 379 aa18.17■□□□□ 0.5
PDLIM7-215ENST00000506161 PI15O43692 258 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms