RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 TTC14Q96N46 770 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 GAD1Q99259 594 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 KIF2CQ99661 725 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 FAM83CQ9BQN1 747 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 CORO1BQ9BR76 489 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 POLR3CQ9BUI4 534 aaPredicted RBP3.8□□□□□ -1.8
TCOF1-208ENST00000506063 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.8□□□□□ -1.8
TCOF1-208ENST00000506063 LRRCC1Q9C099 1032 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 EPN3Q9H201 632 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 RNF39Q9H2S5 420 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 AZI2Q9H6S1 392 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 LRRC4CQ9HCJ2 640 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 VAT1LQ9HCJ6 419 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 PKD2L1Q9P0L9 805 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 CEP72Q9P209 647 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 SLC9A2Q9UBY0 812 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 TBX20Q9UMR3 447 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 FNDC3AQ9Y2H6 1198 aaKnown RBP3.8□□□□□ -1.8
TCOF1-208ENST00000506063 SHANK1Q9Y566 2161 aa3.8□□□□□ -1.8
TCOF1-208ENST00000506063 NBEAL1Q6ZS30 2694 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 FBN1P35555 2871 aaKnown RBP3.79□□□□□ -1.8
TCOF1-208ENST00000506063 NFASCO94856 1347 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 CNTNAP2Q9UHC6 1331 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 ARHGEF17Q96PE2 2063 aaPredicted RBP3.79□□□□□ -1.8
TCOF1-208ENST00000506063 A0A1W2PQD8 194 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 ANO9A1A5B4 782 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 ARL5CA6NH57 179 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 GOLGA8CPA6NN73 597 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 ZBTB5O15062 677 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 RNF113AO15541 343 aaKnown RBP3.79□□□□□ -1.8
TCOF1-208ENST00000506063 CYTH3O43739 400 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 ABLIM3O94929 683 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 SEC24AO95486 1093 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 APPP05067 770 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 SLC3A2P08195 630 aaKnown RBP3.79□□□□□ -1.8
TCOF1-208ENST00000506063 SYPP08247 313 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 TRIM27P14373 513 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 NDUFV2P19404 249 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 COL8A1P27658 744 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 OR1D2P34982 312 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 DCTP40126 519 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 MLH1P40692 756 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 SCNN1GP51170 649 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 GALK1P51570 392 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 UCNP55089 124 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 SKOR1P84550 965 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 ZNF33AQ06730 810 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 SPIRE1Q08AE8 756 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 GRSF1Q12849 480 aaKnown RBP eCLIP3.79□□□□□ -1.8
TCOF1-208ENST00000506063 TARDBPQ13148 414 aaKnown RBP eCLIP3.79□□□□□ -1.8
TCOF1-208ENST00000506063 CRY1Q16526 586 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 ITPRIPL2Q3MIP1 535 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 ARHGAP29Q52LW3 1261 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 ASPRV1Q53RT3 343 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 C6orf118Q5T5N4 469 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 EFCAB12Q6NXP0 572 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 USP17L6PQ6QN14 398 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 CD300LGQ6UXG3 332 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 USP49Q70CQ1 688 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 NLRX1Q86UT6 975 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 SRRM1Q8IYB3 904 aaKnown RBP3.79□□□□□ -1.8
TCOF1-208ENST00000506063 DEFB119Q8N690 84 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 METTL13Q8N6R0 699 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 KBTBD3Q8NAB2 608 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 PNMA1Q8ND90 353 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 USP33Q8TEY7 942 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 SETD7Q8WTS6 366 aaKnown RBP3.79□□□□□ -1.8
TCOF1-208ENST00000506063 TNPO1Q92973 898 aaKnown RBP3.79□□□□□ -1.8
TCOF1-208ENST00000506063 E2F7Q96AV8 911 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 NAF1Q96HR8 494 aaKnown RBP3.79□□□□□ -1.8
TCOF1-208ENST00000506063 FAM193BQ96PV7 902 aaPredicted RBP3.79□□□□□ -1.8
TCOF1-208ENST00000506063 CEP89Q96ST8 783 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 LGMNQ99538 433 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 CDC6Q99741 560 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 TTPALQ9BTX7 342 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 NAPBQ9H115 298 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 LY9Q9HBG7 655 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 AGPAT5Q9NUQ2 364 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 GMIPQ9P107 970 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 MTRRQ9UBK8 725 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 SEPT3Q9UH03 358 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 PIN4Q9Y237 131 aaKnown RBP3.79□□□□□ -1.8
TCOF1-208ENST00000506063 AKT3Q9Y243 479 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 AK5Q9Y6K8 562 aa3.79□□□□□ -1.8
TCOF1-208ENST00000506063 MYH10P35580 1976 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 K7EQS6 105 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 PIK3CDO00329 1044 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 ZNF197O14709 1029 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 FLRT2O43155 660 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 EFSO43281 561 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 TNFSF14O43557 240 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 CILPO75339 1184 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 RECQL4O94761 1208 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 KIF4AO95239 1232 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 DRD1P21728 446 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 FGFR3P22607 806 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 ACTN2P35609 894 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 MTMR1Q13613 665 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 PLEKHG6Q3KR16 790 aa3.78□□□□□ -1.8
TCOF1-208ENST00000506063 FBXO43Q4G163 708 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms