RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 SDHBP21912 280 aa10□□□□□ -0.81
DHFR-202ENST00000504396 GLRA2P23416 452 aa10□□□□□ -0.81
DHFR-202ENST00000504396 ELAVL2Q12926 359 aaKnown RBP10□□□□□ -0.81
DHFR-202ENST00000504396 ZNF528Q3MIS6 628 aa10□□□□□ -0.81
DHFR-202ENST00000504396 AXDND1Q5T1B0 1012 aaPredicted RBP10□□□□□ -0.81
DHFR-202ENST00000504396 PDXDC1Q6P996 788 aa10□□□□□ -0.81
DHFR-202ENST00000504396 TSSK4Q6SA08 328 aa10□□□□□ -0.81
DHFR-202ENST00000504396 ZBTB8OSQ8IWT0 167 aa10□□□□□ -0.81
DHFR-202ENST00000504396 GSTCDQ8NEC7 633 aa10□□□□□ -0.81
DHFR-202ENST00000504396 EIF2AK1Q9BQI3 630 aaKnown RBP10□□□□□ -0.81
DHFR-202ENST00000504396 CLSTN3Q9BQT9 956 aa10□□□□□ -0.81
DHFR-202ENST00000504396 TM6SF1Q9BZW5 370 aa10□□□□□ -0.81
DHFR-202ENST00000504396 ANKEF1Q9NU02 776 aa10□□□□□ -0.81
DHFR-202ENST00000504396 GMEB2Q9UKD1 530 aa10□□□□□ -0.81
DHFR-202ENST00000504396 MRPS23Q9Y3D9 190 aaKnown RBP10□□□□□ -0.81
DHFR-202ENST00000504396 PCDHGA2Q9Y5H1 932 aa10□□□□□ -0.81
DHFR-202ENST00000504396 ZNF292O60281 2723 aa10□□□□□ -0.81
DHFR-202ENST00000504396 EP300Q09472 2414 aaPredicted RBP10□□□□□ -0.81
DHFR-202ENST00000504396 STK36Q9NRP7 1315 aa10□□□□□ -0.81
DHFR-202ENST00000504396 A0A087WWV3 80 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 ADAM12O43184 909 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 DTNBO60941 627 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 RECQL4O94761 1208 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 SLITRK3O94933 977 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 POU2F2P09086 479 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 HOXA9P31269 272 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 ARL2P36404 184 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 MAGEA9P43362 315 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 LMNB2Q03252 620 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 CALCRLQ16602 461 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 ERICH6BQ5W0A0 696 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 RTL10Q7L3V2 364 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 NPAS3Q8IXF0 933 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 GPR161Q8N6U8 529 aaKnown RBP9.99□□□□□ -0.81
DHFR-202ENST00000504396 LNX1Q8TBB1 728 aaPredicted RBP9.99□□□□□ -0.81
DHFR-202ENST00000504396 PIGOQ8TEQ8 1089 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 PIK3R5Q8WYR1 880 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 MCRS1Q96EZ8 462 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 PRIMPOLQ96LW4 560 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 ADPGKQ9BRR6 497 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 BRMS1Q9HCU9 246 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 GPRC5CQ9NQ84 441 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 GJB4Q9NTQ9 266 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 PRMT7Q9NVM4 692 aaPredicted RBP9.99□□□□□ -0.81
DHFR-202ENST00000504396 ZSCAN32Q9NX65 697 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 SNTG2Q9NY99 539 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 RAB23Q9ULC3 237 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 NDRG2Q9UN36 371 aaKnown RBP9.99□□□□□ -0.81
DHFR-202ENST00000504396 PCDHA12Q9UN75 941 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 MRPS17Q9Y2R5 130 aaKnown RBP9.99□□□□□ -0.81
DHFR-202ENST00000504396 GDAQ9Y2T3 454 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 DOCK6Q96HP0 2047 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 A0A1B0GUA9 196 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 N4BP3O15049 544 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 KRT37O76014 449 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 TARSP26639 723 aaKnown RBP9.99□□□□□ -0.81
DHFR-202ENST00000504396 OR1D2P34982 312 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 KRT2P35908 639 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 TXKP42681 527 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 RARRES1P49788 294 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 SPIRE1Q08AE8 756 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 PRPF4BQ13523 1007 aaKnown RBP9.99□□□□□ -0.81
DHFR-202ENST00000504396 LPAL2Q16609 132 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 INTS6LQ5JSJ4 861 aaKnown RBP9.99□□□□□ -0.81
DHFR-202ENST00000504396 GLRA4Q5JXX5 417 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 PPP1R26Q5T8A7 1209 aaPredicted RBP9.99□□□□□ -0.81
DHFR-202ENST00000504396 RSPO2Q6UXX9 243 aaPredicted RBP9.99□□□□□ -0.81
DHFR-202ENST00000504396 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.99□□□□□ -0.81
DHFR-202ENST00000504396 ZNF852Q6ZMS4 543 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 WASF1Q92558 559 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 DDX23Q9BUQ8 820 aaKnown RBP9.99□□□□□ -0.81
DHFR-202ENST00000504396 OSBPL6Q9BZF3 934 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 HEBP1Q9NRV9 189 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 PDRG1Q9NUG6 133 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 DNMT3BQ9UBC3 853 aaKnown RBP9.99□□□□□ -0.81
DHFR-202ENST00000504396 CDY1Q9Y6F8 540 aa9.99□□□□□ -0.81
DHFR-202ENST00000504396 DCDC2BA2VCK2 349 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 PRRG1O14668 218 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 PTGESO14684 152 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 B3GAT3O94766 335 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 LRG1P02750 347 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 FBXO45P0C2W1 286 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 XRCC6P12956 609 aaKnown RBP eCLIP9.98□□□□□ -0.811e-7■■■□□ 16.3
DHFR-202ENST00000504396 ATP2B1P20020 1258 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 ELF1P32519 619 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 ATXN1P54253 815 aaKnown RBP9.98□□□□□ -0.81
DHFR-202ENST00000504396 ARPP19P56211 112 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 SCRN1Q12765 414 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 GRM2Q14416 872 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 PPP2R5DQ14738 602 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 MAPK6Q16659 721 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 EARS2Q5JPH6 523 aaKnown RBP9.98□□□□□ -0.81
DHFR-202ENST00000504396 C6orf118Q5T5N4 469 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 PRR23BQ6ZRT6 265 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 NOSTRINQ8IVI9 506 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 NELL2Q99435 816 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 HSD17B14Q9BPX1 270 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 PDZD7Q9H5P4 517 aa9.98□□□□□ -0.81
DHFR-202ENST00000504396 TTC12Q9H892 705 aaPredicted RBP9.98□□□□□ -0.81
DHFR-202ENST00000504396 BRD9Q9H8M2 597 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms