RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 PAAF1Q9BRP4 392 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 INTS2Q9H0H0 1204 aaKnown RBP23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 XYLT2Q9H1B5 865 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.47■■□□□ 1.353e-10■■■■■ 153.8
ECHDC3-205ENST00000496136 COL4A6Q14031 1691 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 CASTOR2A6NHX0 329 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 ATP2A2P16615 1042 aaKnown RBP23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 RPL9P32969 192 aaKnown RBP23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 APBA1Q02410 837 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 UPP1Q16831 310 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 HERC6Q8IVU3 1022 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 RABGGTAQ92696 567 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 FAM193BQ96PV7 902 aaPredicted RBP23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 UBE2OQ9C0C9 1292 aaKnown RBP23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 NRDE2Q9H7Z3 1164 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 DNAJB4Q9UDY4 337 aa23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 R3HCC1Q9Y3T6 440 aaKnown RBP23.47■■□□□ 1.35
ECHDC3-205ENST00000496136 ASS1P00966 412 aaKnown RBP23.46■■□□□ 1.35
ECHDC3-205ENST00000496136 HTRA4P83105 476 aaPredicted RBP23.46■■□□□ 1.35
ECHDC3-205ENST00000496136 VSTM4Q8IW00 320 aa23.46■■□□□ 1.35
ECHDC3-205ENST00000496136 DDX27Q96GQ7 796 aaKnown RBP23.46■■□□□ 1.35
ECHDC3-205ENST00000496136 PCMTD1Q96MG8 357 aaPredicted RBP23.46■■□□□ 1.35
ECHDC3-205ENST00000496136 YME1L1Q96TA2 773 aa23.46■■□□□ 1.35
ECHDC3-205ENST00000496136 ZBED2Q9BTP6 218 aa23.46■■□□□ 1.35
ECHDC3-205ENST00000496136 HCSTQ9UBK5 93 aa23.46■■□□□ 1.35
ECHDC3-205ENST00000496136 ATICP31939 592 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 LRMPQ12912 555 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 LRRC43Q8N309 656 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 HPDLQ96IR7 371 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 RNPC3Q96LT9 517 aaKnown RBP23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 UROC1Q96N76 676 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 SIX2Q9NPC8 291 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 PLCB1Q9NQ66 1216 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 FAM207AQ9NSI2 230 aaPredicted RBP23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 PODXLO00592 558 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 IGFBP6P24592 240 aaPredicted RBP23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 WDR44Q5JSH3 913 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 SPOPLQ6IQ16 392 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 PHLDB3Q6NSJ2 640 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 CMTR2Q8IYT2 770 aaKnown RBP23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 LRRC52Q8N7C0 313 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 TATDN2Q93075 761 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 LSM14BQ9BX40 385 aaKnown RBP23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 INSL6Q9Y581 213 aa23.45■■□□□ 1.34
ECHDC3-205ENST00000496136 LAMA2P24043 3122 aaKnown RBP23.44■■□□□ 1.34
ECHDC3-205ENST00000496136 ZC3H11AO75152 810 aaKnown RBP eCLIP23.44■■□□□ 1.34
ECHDC3-205ENST00000496136 NOL4O94818 638 aa23.44■■□□□ 1.34
ECHDC3-205ENST00000496136 BTG3Q14201 252 aaPredicted RBP23.44■■□□□ 1.34
ECHDC3-205ENST00000496136 KLHDC7AQ5VTJ3 777 aa23.44■■□□□ 1.34
ECHDC3-205ENST00000496136 SPECC1LQ69YQ0 1117 aa23.44■■□□□ 1.34
ECHDC3-205ENST00000496136 TAF4BQ92750 862 aa23.44■■□□□ 1.34
ECHDC3-205ENST00000496136 IMPG2Q9BZV3 1241 aa23.44■■□□□ 1.34
ECHDC3-205ENST00000496136 CWH43Q9H720 699 aa23.44■■□□□ 1.34
ECHDC3-205ENST00000496136 VRTNQ9H8Y1 702 aa23.44■■□□□ 1.34
ECHDC3-205ENST00000496136 APOBEC3GQ9HC16 384 aaKnown RBP23.44■■□□□ 1.34
ECHDC3-205ENST00000496136 NUB1Q9Y5A7 615 aa23.44■■□□□ 1.34
ECHDC3-205ENST00000496136 RANBP2P49792 3224 aaKnown RBP23.43■■□□□ 1.34
ECHDC3-205ENST00000496136 EPHB6O15197 1021 aa23.43■■□□□ 1.34
ECHDC3-205ENST00000496136 STAU1O95793 577 aaKnown RBP23.43■■□□□ 1.34
ECHDC3-205ENST00000496136 ALDH2P05091 517 aa23.43■■□□□ 1.34
ECHDC3-205ENST00000496136 LILRA4P59901 499 aa23.43■■□□□ 1.34
ECHDC3-205ENST00000496136 NOP14P78316 857 aaKnown RBP23.43■■□□□ 1.34
ECHDC3-205ENST00000496136 MYO1EQ12965 1108 aa23.43■■□□□ 1.34
ECHDC3-205ENST00000496136 ZNF699Q32M78 642 aa23.43■■□□□ 1.34
ECHDC3-205ENST00000496136 WDR72Q3MJ13 1102 aa23.43■■□□□ 1.34
ECHDC3-205ENST00000496136 CCDC150Q8NCX0 1101 aa23.43■■□□□ 1.34
ECHDC3-205ENST00000496136 C3orf58Q8NDZ4 430 aa23.43■■□□□ 1.34
ECHDC3-205ENST00000496136 RAD9AQ99638 391 aa23.43■■□□□ 1.34
ECHDC3-205ENST00000496136 APEX2Q9UBZ4 518 aa23.43■■□□□ 1.34
ECHDC3-205ENST00000496136 ITIH6Q6UXX5 1313 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 B3GAT3O94766 335 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 PNPLA4P41247 253 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 OR1G1P47890 313 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 DCLRE1AQ6PJP8 1040 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 NEK11Q8NG66 645 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 NT5C1BQ96P26 610 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 SPTLC1O15269 473 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 CDC25BP30305 580 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 TAF6P49848 677 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 GJB7Q6PEY0 223 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 CD300LGQ6UXG3 332 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 ARHGEF19Q8IW93 802 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 TMEM175Q9BSA9 504 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 GANQ9H2C0 597 aa23.42■■□□□ 1.34
ECHDC3-205ENST00000496136 KPNA7A9QM74 516 aa23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 NRP1O14786 923 aa23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 TLL1O43897 1013 aa23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 GALTP07902 379 aa23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 UCHL3P15374 230 aa23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 TRIM21P19474 475 aaKnown RBP23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 ZNF667Q5HYK9 610 aa23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 RRAGAQ7L523 313 aa23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 TMC6Q7Z403 805 aa23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 ANP32BQ92688 251 aaKnown RBP23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 ZNF560Q96MR9 790 aa23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 NUP58Q9BVL2 599 aa23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 UBE2TQ9NPD8 197 aaPredicted RBP23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 NXF1Q9UBU9 619 aaKnown RBP23.41■■□□□ 1.34
ECHDC3-205ENST00000496136 FAN1Q9Y2M0 1017 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms