RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	SMG7	Q92540	1137 aa	Known RBP	11.9	□□□□□ -0.5
DCTN1-223	ENST00000495643	CHAMP1	Q96JM3	812 aa		11.9	□□□□□ -0.5
DCTN1-223	ENST00000495643	PRKD2	Q9BZL6	878 aa		11.9	□□□□□ -0.5
DCTN1-223	ENST00000495643	ASB7	Q9H672	318 aa		11.9	□□□□□ -0.5
DCTN1-223	ENST00000495643	MAGEF1	Q9HAY2	307 aa		11.9	□□□□□ -0.5
DCTN1-223	ENST00000495643	WDR6	Q9NNW5	1121 aa	Known RBP	11.9	□□□□□ -0.5
DCTN1-223	ENST00000495643	FAM13B	Q9NYF5	915 aa		11.9	□□□□□ -0.5
DCTN1-223	ENST00000495643	EXOC7	Q9UPT5	735 aa		11.9	□□□□□ -0.5
DCTN1-223	ENST00000495643	DERA	Q9Y315	318 aa		11.9	□□□□□ -0.5
DCTN1-223	ENST00000495643	NUB1	Q9Y5A7	615 aa		11.9	□□□□□ -0.5
DCTN1-223	ENST00000495643	CDY1	Q9Y6F8	540 aa		11.9	□□□□□ -0.5
DCTN1-223	ENST00000495643	PPEF2	O14830	753 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	XPOT	O43592	962 aa	Known RBP	11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	N4BP1	O75113	896 aa	Known RBP	11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	PRPF6	O94906	941 aa	Known RBP	11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	ABLIM3	O94929	683 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	NFIC	P08651	508 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	COL9A1	P20849	921 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	MCM4	P33991	863 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	HOXD13	P35453	343 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	EHHADH	Q08426	723 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	TMEM132D	Q14C87	1099 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	PTPN21	Q16825	1174 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	CCDC149	Q6ZUS6	474 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	EPM2AIP1	Q7L775	607 aa	Predicted RBP	11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	PLCD3	Q8N3E9	789 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	HPS3	Q969F9	1004 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	FAM212A	Q96EL1	285 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	LIMD1	Q9UGP4	676 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	KCNH3	Q9ULD8	1083 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	PCDHB8	Q9UN66	801 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	C2CD2	Q9Y426	696 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	DOCK8	Q8NF50	2099 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	SCN1A	P35498	2009 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	NOTCH4	Q99466	2003 aa		11.89	□□□□□ -0.51
DCTN1-223	ENST00000495643	CLUH	O75153	1309 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	ANO9	A1A5B4	782 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643		H7C4K7	107 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	PIR	O00625	290 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	C8A	P07357	584 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	GART	P22102	1010 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	CMA1	P23946	247 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	CASP1	P29466	404 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	HOXA9	P31269	272 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	LILRA4	P59901	499 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	ASIC1	P78348	528 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	ROR1	Q01973	937 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	UVSSA	Q2YD98	709 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	LIN9	Q5TKA1	542 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	C9orf57	Q5W0N0	161 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	TRIM67	Q6ZTA4	783 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	RTL10	Q7L3V2	364 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	OTOP3	Q7RTS5	596 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	SYCP3	Q8IZU3	236 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	TDRD5	Q8NAT2	981 aa	Known RBP	11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	APPL2	Q8NEU8	664 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	BEST2	Q8NFU1	509 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	ZNF461	Q8TAF7	563 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	TMEM206	Q9H813	350 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	FBXL5	Q9UKA1	691 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	TSC2	P49815	1807 aa		11.88	□□□□□ -0.51
DCTN1-223	ENST00000495643	PVALEF	A0A1B0GWK0	134 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	WDR27	A2RRH5	827 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	SPTLC1	O15269	473 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	EIF3D	O15371	548 aa	Known RBP eCLIP	11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	ACTN4	O43707	911 aa	Known RBP	11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	OAZ2	O95190	189 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	IL18RAP	O95256	599 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	LDHA	P00338	332 aa	Known RBP	11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	ASGR2	P07307	311 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	POU2F2	P09086	479 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	SLFN14	P0C7P3	912 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	PAX3	P23760	479 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	WNT7B	P56706	349 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	KRT85	P78386	507 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	CUL4B	Q13620	913 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	CTXN3	Q4LDR2	81 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	FAM26F	Q5R3K3	315 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	PPM1L	Q5SGD2	360 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	HFE2	Q6ZVN8	426 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	STXBP4	Q6ZWJ1	553 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	UNC13D	Q70J99	1090 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	EFCAB13	Q8IY85	973 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	SLC7A14	Q8TBB6	771 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	ZNF507	Q8TCN5	953 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	ACSF2	Q96CM8	615 aa	Predicted RBP	11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	SAAL1	Q96ER3	474 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	SPATA32	Q96LK8	384 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	MYADM	Q96S97	322 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	PYM1	Q9BRP8	204 aa	Known RBP	11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	CBWD1	Q9BRT8	395 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	FAM213A	Q9BRX8	229 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	BLZF1	Q9H2G9	400 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	PIDD1	Q9HB75	910 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	DPP3	Q9NY33	737 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	SERTAD1	Q9UHV2	236 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	RAPGEFL1	Q9UHV5	662 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	SORCS3	Q9UPU3	1222 aa		11.87	□□□□□ -0.51
DCTN1-223	ENST00000495643	HPSE	Q9Y251	543 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms