RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 RPLP2P05387 115 aaKnown RBP12.32□□□□□ -0.44
HDLBP-245ENST00000494862 NFICP08651 508 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 PRLRP16471 622 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 VEGFBP49765 207 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 ATN1P54259 1190 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-245ENST00000494862 ARHGEF6Q15052 776 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 TCEAL1Q15170 157 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 ZNF699Q32M78 642 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 TAF3Q5VWG9 929 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 JADE1Q6IE81 842 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 RSPH3Q86UC2 560 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 PCSK9Q8NBP7 692 aaKnown RBP12.32□□□□□ -0.44
HDLBP-245ENST00000494862 PXYLP1Q8TE99 480 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 CTNNBL1Q8WYA6 563 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-245ENST00000494862 CALR3Q96L12 384 aaKnown RBP12.32□□□□□ -0.44
HDLBP-245ENST00000494862 PCDHB18PQ96TA0 734 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 ARID3AQ99856 593 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 NIF3L1Q9GZT8 377 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 XYLT2Q9H1B5 865 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 TSKSQ9UJT2 592 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 DERAQ9Y315 318 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 C2CD2Q9Y426 696 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 PCDHB2Q9Y5E7 798 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 SAR1BQ9Y6B6 198 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 UMODL1Q5DID0 1318 aa12.32□□□□□ -0.44
HDLBP-245ENST00000494862 GRID2IPA4D2P6 1211 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 TMCO5BA8MYB1 307 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 PALMO75781 387 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 FTLP02792 175 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-245ENST00000494862 MMEP08473 750 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 ATICP31939 592 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 NOP2P46087 812 aaKnown RBP12.31□□□□□ -0.44
HDLBP-245ENST00000494862 ZNF132P52740 706 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 PRMT2P55345 433 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 YWHAEP62258 255 aaKnown RBP12.31□□□□□ -0.44
HDLBP-245ENST00000494862 MRPS6P82932 125 aaKnown RBP12.31□□□□□ -0.44
HDLBP-245ENST00000494862 TMEM132DQ14C87 1099 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 KCNA10Q16322 511 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 SCARA3Q6AZY7 606 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-245ENST00000494862 CCSAPQ6IQ19 270 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-245ENST00000494862 GDF6Q6KF10 455 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-245ENST00000494862 RPAINQ86UA6 219 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 DNAAF5Q86Y56 855 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 PALB2Q86YC2 1186 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 HS6ST3Q8IZP7 471 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 C1orf127Q8N9H9 656 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 TPCN2Q8NHX9 752 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 RAET1EQ8TD07 263 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 RFFLQ8WZ73 363 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 CELF4Q9BZC1 486 aaKnown RBP12.31□□□□□ -0.44
HDLBP-245ENST00000494862 VRTNQ9H8Y1 702 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 ACP6Q9NPH0 428 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 TAS2R14Q9NYV8 317 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 DDX20Q9UHI6 824 aaKnown RBP12.31□□□□□ -0.44
HDLBP-245ENST00000494862 SIX4Q9UIU6 781 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 SNX12Q9UMY4 172 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 HYOU1Q9Y4L1 999 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 TRPV2Q9Y5S1 764 aa12.31□□□□□ -0.44
HDLBP-245ENST00000494862 EFCAB8A8MWE9 144 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 M0QZ92 97 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 FKTNO75072 461 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 CABYRO75952 493 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 CLSTN1O94985 981 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 STAU1O95793 577 aaKnown RBP12.3□□□□□ -0.44
HDLBP-245ENST00000494862 ASGR1P07306 291 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 TCP1P17987 556 aaKnown RBP12.3□□□□□ -0.44
HDLBP-245ENST00000494862 YARSP54577 528 aaKnown RBP12.3□□□□□ -0.44
HDLBP-245ENST00000494862 GPC5P78333 572 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 CKAP4Q07065 602 aaKnown RBP12.3□□□□□ -0.44
HDLBP-245ENST00000494862 CLEC16AQ2KHT3 1053 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 ACAD10Q6JQN1 1059 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 TMEM270Q6UE05 265 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 TRIM72Q6ZMU5 477 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 RBBP8NLQ8NC74 664 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-245ENST00000494862 LRRN4CLQ8ND94 238 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 TMEM40Q8WWA1 233 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 TSC1Q92574 1164 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 SNX27Q96L92 541 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 TSPAN18Q96SJ8 248 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 EIF2AQ9BY44 585 aaKnown RBP12.3□□□□□ -0.44
HDLBP-245ENST00000494862 SNTG2Q9NY99 539 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 ITGA11Q9UKX5 1188 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 CDY2AQ9Y6F7 541 aa12.3□□□□□ -0.44
HDLBP-245ENST00000494862 SCN10AQ9Y5Y9 1956 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 ITGB3P05106 788 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 KRT19P08727 400 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 ABCB4P21439 1286 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 GNA15P30679 374 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 HADHBP55084 474 aaKnown RBP12.29□□□□□ -0.44
HDLBP-245ENST00000494862 TUBB4BP68371 445 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 RBP5P82980 135 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 PTPN11Q06124 597 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-245ENST00000494862 FAM47CQ5HY64 1035 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 ZNF667Q5HYK9 610 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 UBXN11Q5T124 520 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 MEI1Q5TIA1 1274 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 PPP1R2P3Q6NXS1 205 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 SLFN11Q7Z7L1 901 aa12.29□□□□□ -0.44
HDLBP-245ENST00000494862 RNF180Q86T96 592 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms