RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ACLYP53396 1101 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 MGAT3Q09327 533 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 TAF3Q5VWG9 929 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 LHX8Q68G74 356 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 ALKAL1Q6UXT8 129 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 RNF180Q86T96 592 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 RSPH3Q86UC2 560 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 ZNF677Q86XU0 584 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 TMEM130Q8N3G9 435 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 FAXDC2Q96IV6 333 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 NXF3Q9H4D5 531 aaKnown RBP10.12□□□□□ -0.79
SF3B1-211ENST00000487698 VRTNQ9H8Y1 702 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 SNTG2Q9NY99 539 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 JRKLQ9Y4A0 524 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 PCDHB2Q9Y5E7 798 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 CDY2AQ9Y6F7 541 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 ANKRD62A6NC57 917 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 M0QZ92 97 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 ENC1O14682 589 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 CHRNA1P02708 482 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 ITGB3P05106 788 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 BPIFB4P59827 614 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 ARHGEF6Q15052 776 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 FAM47CQ5HY64 1035 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 TMEM270Q6UE05 265 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 RBBP8NLQ8NC74 664 aaPredicted RBP10.12□□□□□ -0.79
SF3B1-211ENST00000487698 LRRN4CLQ8ND94 238 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 RFFLQ8WZ73 363 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 BCO2Q9BYV7 579 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 CXCL16Q9H2A7 254 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 SEPT11Q9NVA2 429 aaKnown RBP10.12□□□□□ -0.79
SF3B1-211ENST00000487698 CNTN3Q9P232 1028 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 ITGA11Q9UKX5 1188 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 NOC2LQ9Y3T9 749 aaKnown RBP10.12□□□□□ -0.79
SF3B1-211ENST00000487698 PCDHB4Q9Y5E5 795 aa10.12□□□□□ -0.79
SF3B1-211ENST00000487698 GRID2IPA4D2P6 1211 aa10.11□□□□□ -0.79
SF3B1-211ENST00000487698 MOXD2PA6NHM9 499 aa10.11□□□□□ -0.79
SF3B1-211ENST00000487698 TMCO5BA8MYB1 307 aa10.11□□□□□ -0.79
SF3B1-211ENST00000487698 RTN2O75298 545 aa10.11□□□□□ -0.79
SF3B1-211ENST00000487698 STAU1O95793 577 aaKnown RBP10.11□□□□□ -0.79
SF3B1-211ENST00000487698 CALCAP01258 141 aa10.11□□□□□ -0.79
SF3B1-211ENST00000487698 ATICP31939 592 aa10.11□□□□□ -0.79
SF3B1-211ENST00000487698 GRK4P32298 578 aa10.11□□□□□ -0.79
SF3B1-211ENST00000487698 PTPN11Q06124 597 aaPredicted RBP10.11□□□□□ -0.79
SF3B1-211ENST00000487698 TCEAL1Q15170 157 aa10.11□□□□□ -0.79
SF3B1-211ENST00000487698 ZBTB6Q15916 424 aa10.11□□□□□ -0.79
SF3B1-211ENST00000487698 PTGISQ16647 500 aa10.11□□□□□ -0.79
SF3B1-211ENST00000487698 LRRC57Q8N9N7 239 aa10.11□□□□□ -0.79
SF3B1-211ENST00000487698 ZMAT2Q96NC0 199 aaKnown RBP10.11□□□□□ -0.79
SF3B1-211ENST00000487698 TSEN34Q9BSV6 310 aaKnown RBP10.11□□□□□ -0.79
SF3B1-211ENST00000487698 HES2Q9Y543 173 aa10.11□□□□□ -0.79
SF3B1-211ENST00000487698 BRCA2P51587 3418 aa10.11□□□□□ -0.79
SF3B1-211ENST00000487698 PALMO75781 387 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 RECQL4O94761 1208 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 MYCNP04198 464 aaPredicted RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 KRT19P08727 400 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 GUCY2FP51841 1108 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 YARSP54577 528 aaKnown RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 ITGA7Q13683 1181 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 CLEC16AQ2KHT3 1053 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 TRIM71Q2Q1W2 868 aaKnown RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 XKR4Q5GH76 650 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 SMG8Q8ND04 991 aaKnown RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 TPCN2Q8NHX9 752 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 CTNNBL1Q8WYA6 563 aaPredicted RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 ARHGEF26Q96DR7 871 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 KIF12Q96FN5 646 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 CARD6Q9BX69 1037 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 TLR10Q9BXR5 811 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 TRIM6Q9C030 488 aaPredicted RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 THAP2Q9H0W7 228 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 HMX1Q9NP08 348 aaPredicted RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 CISHQ9NSE2 258 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 DPP3Q9NY33 737 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 SAR1BQ9Y6B6 198 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 PTCH2Q9Y6C5 1203 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 DYNC1I1O14576 645 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 TADA3O75528 432 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 TFRCP02786 760 aaKnown RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 FTLP02792 175 aaPredicted RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 CYP1A1P04798 512 aaPredicted RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 CTSHP09668 335 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 UNGP13051 313 aaPredicted RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 PRLRP16471 622 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 ABCB4P21439 1286 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 GNA15P30679 374 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 POLR2BP30876 1174 aaKnown RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 HADHBP55084 474 aaKnown RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 PTK7Q13308 1070 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 IFI16Q16666 785 aaKnown RBP10.1□□□□□ -0.79
SF3B1-211ENST00000487698 WHAMMP3Q1A5X7 153 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 ZNF667Q5HYK9 610 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 TSPAN18Q96SJ8 248 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 SNX12Q9UMY4 172 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 POLIQ9UNA4 740 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 IPPQ9Y573 584 aa10.1□□□□□ -0.79
SF3B1-211ENST00000487698 RPS6KA5O75582 802 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 CLSTN1O94985 981 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 WEE2P0C1S8 567 aa10.09□□□□□ -0.79
SF3B1-211ENST00000487698 NAP1L1P55209 391 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms