RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, human

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-234	ENST00000487604	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.96	□□□□□ -1.62
RBM39-234	ENST00000487604	VSX1	Q9NZR4	365 aa	Predicted RBP	4.96	□□□□□ -1.62
RBM39-234	ENST00000487604	LRIT1	Q9P2V4	623 aa		4.96	□□□□□ -1.62
RBM39-234	ENST00000487604	DMTF1	Q9Y222	760 aa		4.96	□□□□□ -1.62
RBM39-234	ENST00000487604	CLSTN1	O94985	981 aa		4.95	□□□□□ -1.62
RBM39-234	ENST00000487604	TARDBP	Q13148	414 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
RBM39-234	ENST00000487604	SP5	Q6BEB4	398 aa	Predicted RBP	4.95	□□□□□ -1.62
RBM39-234	ENST00000487604	ARHGEF25	Q86VW2	580 aa		4.95	□□□□□ -1.62
RBM39-234	ENST00000487604	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
RBM39-234	ENST00000487604	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.95	□□□□□ -1.62
RBM39-234	ENST00000487604	ACTRT2	Q8TDY3	377 aa		4.95	□□□□□ -1.62
RBM39-234	ENST00000487604	SSH3	Q8TE77	659 aa		4.95	□□□□□ -1.62
RBM39-234	ENST00000487604	RAB24	Q969Q5	203 aa		4.95	□□□□□ -1.62
RBM39-234	ENST00000487604	SPATA5L1	Q9BVQ7	753 aa		4.95	□□□□□ -1.62
RBM39-234	ENST00000487604	SLC5A4	Q9NY91	659 aa		4.95	□□□□□ -1.62
RBM39-234	ENST00000487604	TUBD1	Q9UJT1	453 aa		4.95	□□□□□ -1.62
RBM39-234	ENST00000487604	TRGV11	A0A075B6L2	103 aa		4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	LRRC3C	A6NJW4	275 aa		4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	SBK3	P0C264	359 aa		4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	NHLH1	Q02575	133 aa		4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	SF3B3	Q15393	1217 aa	Known RBP	4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	CLUL1	Q15846	466 aa		4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	CBARP	Q8N350	705 aa	Predicted RBP	4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	CNTD1	Q8N815	330 aa		4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	IFI44	Q8TCB0	444 aa		4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	SSH1	Q8WYL5	1049 aa		4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	JADE3	Q92613	823 aa		4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	TLR10	Q9BXR5	811 aa		4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	PUS7L	Q9H0K6	701 aa	Known RBP	4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	PRKAB1	Q9Y478	270 aa		4.94	□□□□□ -1.62
RBM39-234	ENST00000487604	PCDHA13	Q9Y5I0	950 aa		4.94	□□□□□ -1.62
RBM39-234	ENST00000487604		A0A1W2PS29	197 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	GRM6	O15303	877 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	PEX1	O43933	1283 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	NDUFS2	O75306	463 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	HAUS5	O94927	633 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	AGFG2	O95081	481 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	C1R	P00736	705 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	FOLR3	P41439	243 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	UTP14C	Q5TAP6	766 aa	Known RBP	4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	EGFLAM	Q63HQ2	1017 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	VWA1	Q6PCB0	445 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	PGM2L1	Q6PCE3	622 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	RSPH3	Q86UC2	560 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.93	□□□□□ -1.62	2e-6	■□□□□ 9.8
RBM39-234	ENST00000487604	IL17RD	Q8NFM7	739 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	ZNF384	Q8TF68	577 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	TMX3	Q96JJ7	454 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	KLK15	Q9H2R5	256 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	IL17RB	Q9NRM6	502 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	TDP1	Q9NUW8	608 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	SLC17A6	Q9P2U8	582 aa		4.93	□□□□□ -1.62
RBM39-234	ENST00000487604	YY2	O15391	372 aa		4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	MTHFD1	P11586	935 aa	Known RBP	4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	C5AR1	P21730	350 aa		4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	IARS	P41252	1262 aa	Known RBP	4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	CDC42EP1	Q00587	391 aa		4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	ATP2B3	Q16720	1220 aa		4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	FLYWCH1	Q4VC44	716 aa		4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	PABPC1L	Q4VXU2	614 aa	Known RBP	4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	LRCH2	Q5VUJ6	765 aa		4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	KIAA0895L	Q68EN5	471 aa		4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	SAP30BP	Q9UHR5	308 aa	Known RBP	4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	LIMCH1	Q9UPQ0	1083 aa		4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	FRMD4B	Q9Y2L6	1034 aa		4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	IPP	Q9Y573	584 aa		4.92	□□□□□ -1.62
RBM39-234	ENST00000487604	PRAMEF33	A0A0G2JMD5	474 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	PCDHGA12	O60330	932 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	PRAMEF10	O60809	474 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	SLC43A1	O75387	559 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	RBMXL2	O75526	392 aa	Known RBP	4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	SRGN	P10124	158 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	KCNA2	P16389	499 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	GATA3	P23771	443 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	EDNRB	P24530	442 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	ZNF280A	P59817	542 aa	Predicted RBP	4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	MIGA2	Q7L4E1	593 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	CLNK	Q7Z7G1	428 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	HDAC10	Q969S8	669 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	TMEM125	Q96AQ2	219 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	FAXDC2	Q96IV6	333 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	KLHL32	Q96NJ5	620 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	TMX1	Q9H3N1	280 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	ASB6	Q9NWX5	421 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	MKS1	Q9NXB0	559 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	JKAMP	Q9P055	326 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	CTTNBP2NL	Q9P2B4	639 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	MCM8	Q9UJA3	840 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	SLC45A2	Q9UMX9	530 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	CDYL	Q9Y232	598 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	PCDHGA8	Q9Y5G5	932 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	PCDHGA7	Q9Y5G6	932 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	PCDHGA6	Q9Y5G7	932 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	PCDHGA3	Q9Y5H0	932 aa		4.91	□□□□□ -1.62
RBM39-234	ENST00000487604	KLHL33	A6NCF5	533 aa		4.9	□□□□□ -1.63
RBM39-234	ENST00000487604	INO80B-WBP1	J3KQ70	363 aa		4.9	□□□□□ -1.63
RBM39-234	ENST00000487604	HTRA2	O43464	458 aa	Predicted RBP	4.9	□□□□□ -1.63
RBM39-234	ENST00000487604	PROM1	O43490	865 aa		4.9	□□□□□ -1.63

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