RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 TRIP11Q15643 1979 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 RALGAPA1Q6GYQ0 2036 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 ASPMQ8IZT6 3477 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 HEPACAM2A8MVW5 462 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 MEFVO15553 781 aaPredicted RBP16.4■□□□□ 0.22
PFDN4-204ENST00000487129 TRAPPC3O43617 180 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 FOXD2O60548 495 aaPredicted RBP16.4■□□□□ 0.22
PFDN4-204ENST00000487129 SCRN1Q12765 414 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 DCAF4L1Q3SXM0 396 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 HEATR6Q6AI08 1181 aaKnown RBP16.4■□□□□ 0.22
PFDN4-204ENST00000487129 CEP120Q8N960 986 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 SHKBP1Q8TBC3 707 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 ZMAT2Q96NC0 199 aaKnown RBP16.4■□□□□ 0.22
PFDN4-204ENST00000487129 LRRC3BQ96PB8 259 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 ADPGKQ9BRR6 497 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 KIFC3Q9BVG8 833 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 LRRC3Q9BY71 257 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 GREB1Q4ZG55 1949 aa16.4■□□□□ 0.22
PFDN4-204ENST00000487129 SLC38A8A6NNN8 435 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 ZNF263O14978 683 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 MED24O75448 989 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 CTDNEP1O95476 244 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 ATP2B1P20020 1258 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 KCNA4P22459 653 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 ELF1P32519 619 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 NAMPTP43490 491 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 FCHO2Q0JRZ9 810 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 TEAD2Q15562 447 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 CALCRLQ16602 461 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 TPGS2Q68CL5 300 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 WDR5BQ86VZ2 330 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 CATSPER3Q86XQ3 398 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 MSANTD3Q96H12 275 aa16.39■□□□□ 0.21
PFDN4-204ENST00000487129 CCDC43Q96MW1 224 aaKnown RBP16.39■□□□□ 0.21
PFDN4-204ENST00000487129 MYBPHLA2RUH7 354 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 PODXLO00592 558 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 SYN3O14994 580 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 VNN2O95498 520 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 HOXB3P14651 431 aaPredicted RBP16.38■□□□□ 0.21
PFDN4-204ENST00000487129 CTHP32929 405 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 ARPP19P56211 112 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 TWF1Q12792 350 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 CCINQ13939 588 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 CCDC6Q16204 474 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 CYP4A22Q5TCH4 519 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 IL31Q6EBC2 164 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 CPLX2Q6PUV4 134 aaKnown RBP16.38■□□□□ 0.21
PFDN4-204ENST00000487129 TMC8Q8IU68 726 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 MKNK1Q9BUB5 465 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 SDK1Q7Z5N4 2213 aa16.38■□□□□ 0.21
PFDN4-204ENST00000487129 PDCD11Q14690 1871 aaKnown RBP16.37■□□□□ 0.21
PFDN4-204ENST00000487129 LAMA1P25391 3075 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 SPECC1L-ADORA2AF8WAN1 911 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 CHADO15335 359 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 ZNF806P0C7X5 589 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 MYL4P12829 197 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 LIG1P18858 919 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 CYP11B2P19099 503 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 TXKP42681 527 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 RAP1GAPP47736 663 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 LRRC32Q14392 662 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 AASDHQ4L235 1098 aaPredicted RBP16.37■□□□□ 0.21
PFDN4-204ENST00000487129 PLA2G2CQ5R387 149 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 STXBP5Q5T5C0 1151 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 ATF7IP2Q5U623 682 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 PKN3Q6P5Z2 889 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 BEST2Q8NFU1 509 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 DNAJC25Q9H1X3 360 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 ARRDC1-AS1Q9H2J1 176 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 TMEM60Q9H2L4 133 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 PTPRHQ9HD43 1115 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 AFF4Q9UHB7 1163 aaKnown RBP16.37■□□□□ 0.21
PFDN4-204ENST00000487129 IGF2RP11717 2491 aa16.37■□□□□ 0.21
PFDN4-204ENST00000487129 NEMFO60524 1076 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 EPN2O95208 641 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 PROS1P07225 676 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 FDPSP14324 419 aaKnown RBP16.36■□□□□ 0.21
PFDN4-204ENST00000487129 GRM5P41594 1212 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 COL9A2Q14055 689 aaPredicted RBP16.36■□□□□ 0.21
PFDN4-204ENST00000487129 TMEM132AQ24JP5 1023 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 CTXN3Q4LDR2 81 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 STPG1Q5TH74 334 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 IQCEQ6IPM2 695 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 C1orf228Q6PIY5 440 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 PADI6Q6TGC4 694 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 RNF19BQ6ZMZ0 732 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 LEMD2Q8NC56 503 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 DEPTORQ8TB45 409 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 SUSD3Q96L08 255 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 ZNF512Q96ME7 567 aaPredicted RBP16.36■□□□□ 0.21
PFDN4-204ENST00000487129 CDT1Q9H211 546 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 CRISPLD1Q9H336 500 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 C8orf33Q9H7E9 229 aaPredicted RBP16.36■□□□□ 0.21
PFDN4-204ENST00000487129 POLD4Q9HCU8 107 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 TUFT1Q9NNX1 390 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 ASAH2Q9NR71 780 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 WASF3Q9UPY6 502 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 TNFSF13BQ9Y275 285 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 YIPF1Q9Y548 306 aa16.36■□□□□ 0.21
PFDN4-204ENST00000487129 CYP46A1Q9Y6A2 500 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms