RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 UBXN2BQ14CS0 331 aa20.99■□□□□ 0.95
COL27A1-205ENST00000485397 PRSS36Q5K4E3 855 aa20.99■□□□□ 0.95
COL27A1-205ENST00000485397 ZNF280DQ6N043 979 aa20.99■□□□□ 0.95
COL27A1-205ENST00000485397 MAML2Q8IZL2 1156 aaPredicted RBP20.99■□□□□ 0.95
COL27A1-205ENST00000485397 KCTD17Q8N5Z5 321 aa20.99■□□□□ 0.95
COL27A1-205ENST00000485397 CFAP54Q96N23 3096 aa20.99■□□□□ 0.95
COL27A1-205ENST00000485397 FAM170BA6NMN3 283 aa20.98■□□□□ 0.95
COL27A1-205ENST00000485397 CCR2P41597 374 aa20.98■□□□□ 0.95
COL27A1-205ENST00000485397 NCKAP1LP55160 1127 aa20.98■□□□□ 0.95
COL27A1-205ENST00000485397 ADCY1Q08828 1119 aa20.98■□□□□ 0.95
COL27A1-205ENST00000485397 ARL6IP4Q66PJ3 421 aaKnown RBP20.98■□□□□ 0.95
COL27A1-205ENST00000485397 TPGS2Q68CL5 300 aa20.98■□□□□ 0.95
COL27A1-205ENST00000485397 HS6ST3Q8IZP7 471 aa20.98■□□□□ 0.95
COL27A1-205ENST00000485397 APPL2Q8NEU8 664 aa20.98■□□□□ 0.95
COL27A1-205ENST00000485397 LRRC15Q8TF66 581 aa20.98■□□□□ 0.95
COL27A1-205ENST00000485397 SEMA4AQ9H3S1 761 aa20.98■□□□□ 0.95
COL27A1-205ENST00000485397 LTB4R2Q9NPC1 389 aa20.98■□□□□ 0.95
COL27A1-205ENST00000485397 KCND2Q9NZV8 630 aa20.98■□□□□ 0.95
COL27A1-205ENST00000485397 PCDHB8Q9UN66 801 aa20.98■□□□□ 0.95
COL27A1-205ENST00000485397 CACNA1IQ9P0X4 2223 aa20.98■□□□□ 0.95
COL27A1-205ENST00000485397 MARCKSP29966 332 aaPredicted RBP20.97■□□□□ 0.95
COL27A1-205ENST00000485397 TNFSF9P41273 254 aa20.97■□□□□ 0.95
COL27A1-205ENST00000485397 TPRG1Q6ZUI0 275 aa20.97■□□□□ 0.95
COL27A1-205ENST00000485397 HAUS6Q7Z4H7 955 aa20.97■□□□□ 0.95
COL27A1-205ENST00000485397 KIF12Q96FN5 646 aa20.97■□□□□ 0.95
COL27A1-205ENST00000485397 BICD1Q96G01 975 aa20.97■□□□□ 0.95
COL27A1-205ENST00000485397 BCO2Q9BYV7 579 aa20.97■□□□□ 0.95
COL27A1-205ENST00000485397 SPATA6Q9NWH7 488 aaPredicted RBP20.97■□□□□ 0.95
COL27A1-205ENST00000485397 CEP72Q9P209 647 aa20.97■□□□□ 0.95
COL27A1-205ENST00000485397 LARSQ9P2J5 1176 aaKnown RBP20.97■□□□□ 0.95
COL27A1-205ENST00000485397 AFF4Q9UHB7 1163 aaKnown RBP20.97■□□□□ 0.95
COL27A1-205ENST00000485397 TIMM13Q9Y5L4 95 aaPredicted RBP20.97■□□□□ 0.95
COL27A1-205ENST00000485397 GVINP1Q7Z2Y8 2422 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 MYH11P35749 1972 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 TTC26A0AVF1 554 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 CLTAP09496 248 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 FCARP24071 287 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 GUCY2FP51841 1108 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 TWF1Q12792 350 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 DHX8Q14562 1220 aaKnown RBP20.96■□□□□ 0.95
COL27A1-205ENST00000485397 ZBTB6Q15916 424 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 FAM78AQ5JUQ0 283 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 ZBTB41Q5SVQ8 909 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 RNF19BQ6ZMZ0 732 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 PDZD4Q76G19 769 aaPredicted RBP20.96■□□□□ 0.95
COL27A1-205ENST00000485397 ELSPBP1Q96BH3 223 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 REEP2Q9BRK0 252 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 OSBPL6Q9BZF3 934 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 PLEKHA5Q9HAU0 1116 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 HEBP1Q9NRV9 189 aa20.96■□□□□ 0.95
COL27A1-205ENST00000485397 LACTBL1A8MY62 500 aa20.95■□□□□ 0.94
COL27A1-205ENST00000485397 H0YCG3 227 aa20.95■□□□□ 0.94
COL27A1-205ENST00000485397 M0QZQ0 153 aa20.95■□□□□ 0.94
COL27A1-205ENST00000485397 ZNF197O14709 1029 aa20.95■□□□□ 0.94
COL27A1-205ENST00000485397 MOSPD3O75425 235 aa20.95■□□□□ 0.94
COL27A1-205ENST00000485397 CPB1P15086 417 aa20.95■□□□□ 0.94
COL27A1-205ENST00000485397 TARSP26639 723 aaKnown RBP20.95■□□□□ 0.94
COL27A1-205ENST00000485397 LRPAP1P30533 357 aa20.95■□□□□ 0.94
COL27A1-205ENST00000485397 GRM2Q14416 872 aa20.95■□□□□ 0.94
COL27A1-205ENST00000485397 CYP4A22Q5TCH4 519 aa20.95■□□□□ 0.94
COL27A1-205ENST00000485397 ZC3H14Q6PJT7 736 aaKnown RBP20.95■□□□□ 0.94
COL27A1-205ENST00000485397 GPBP1Q86WP2 473 aa20.95■□□□□ 0.94
COL27A1-205ENST00000485397 ZNF512Q96ME7 567 aaPredicted RBP20.95■□□□□ 0.94
COL27A1-205ENST00000485397 ZSWIM3Q96MP5 696 aa20.95■□□□□ 0.94
COL27A1-205ENST00000485397 UBQLN1Q9UMX0 589 aaKnown RBP20.95■□□□□ 0.94
COL27A1-205ENST00000485397 PDCD11Q14690 1871 aaKnown RBP20.94■□□□□ 0.94
COL27A1-205ENST00000485397 EP300Q09472 2414 aaPredicted RBP20.94■□□□□ 0.94
COL27A1-205ENST00000485397 SHISA7A6NL88 538 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 OR4Q2P0C623 313 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 GJA1P17302 382 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 ID4P47928 161 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 LIG4P49917 911 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 PPP2R3AQ06190 1150 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 IQCEQ6IPM2 695 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 ELMOD1Q8N336 334 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 KCNN1Q92952 543 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 AK8Q96MA6 479 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 ZFP14Q9HCL3 533 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 BLOC1S4Q9NUP1 217 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 ODF2LQ9ULJ1 636 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 TBX20Q9UMR3 447 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 SPTBN4Q9H254 2564 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 MIA3Q5JRA6 1907 aa20.94■□□□□ 0.94
COL27A1-205ENST00000485397 VPS13AQ96RL7 3174 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 LAMTOR5O43504 91 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 FAM189A1O60320 539 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 MICAL2O94851 1124 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 FAM13AO94988 1023 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 OAZ2O95190 189 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 VNN2O95498 520 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 MYL4P12829 197 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 CYP3A5P20815 502 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 UBA7P41226 1012 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 YWHAHQ04917 246 aaPredicted RBP20.93■□□□□ 0.94
COL27A1-205ENST00000485397 GRIN1Q05586 938 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 MCM6Q14566 821 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 ENOX2Q16206 610 aaKnown RBP20.93■□□□□ 0.94
COL27A1-205ENST00000485397 MYCT1Q8N699 235 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 CALML4Q96GE6 196 aa20.93■□□□□ 0.94
COL27A1-205ENST00000485397 ASB16Q96NS5 453 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms