RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 PPEF2O14830 753 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 CYP26A1O43174 497 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 CCP110O43303 1012 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 AKR1B10O60218 316 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 ZNF623O75123 536 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 CALCAP01258 141 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 SELPP16109 830 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 ATF7P17544 494 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-226ENST00000483656 ATN1P54259 1190 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-226ENST00000483656 YARSP54577 528 aaKnown RBP10.85□□□□□ -0.67
HDAC6-226ENST00000483656 TRPC3Q13507 836 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 PKN2Q16513 984 aaKnown RBP10.85□□□□□ -0.67
HDAC6-226ENST00000483656 SLC18A3Q16572 532 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 ZNF699Q32M78 642 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 GLRA4Q5JXX5 417 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 USP38Q8NB14 1042 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 CAGE1Q8TC20 777 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 SLC20A1Q8WUM9 679 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 LINC01599Q8WXQ3 324 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 TAF4BQ92750 862 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 JAKMIP2Q96AA8 810 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 FAM81BQ96LP2 452 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 NIF3L1Q9GZT8 377 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 LACRTQ9GZZ8 138 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 VRTNQ9H8Y1 702 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 TUBGCP4Q9UGJ1 667 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 ADAMTS1Q9UHI8 967 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 NOCTQ9UK39 431 aaKnown RBP10.85□□□□□ -0.67
HDAC6-226ENST00000483656 POLIQ9UNA4 740 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 AGAP1Q9UPQ3 857 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 CNTN6Q9UQ52 1028 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 PCDHA13Q9Y5I0 950 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 CITO14578 2027 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 TRIP11Q15643 1979 aa10.85□□□□□ -0.67
HDAC6-226ENST00000483656 NBNO60934 754 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 STAU1O95793 577 aaKnown RBP10.84□□□□□ -0.67
HDAC6-226ENST00000483656 KRT19P08727 400 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 ITGA4P13612 1032 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 ZSCAN20P17040 1043 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-226ENST00000483656 TBXAS1P24557 533 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-226ENST00000483656 ANXA13P27216 316 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 POLR2BP30876 1174 aaKnown RBP10.84□□□□□ -0.67
HDAC6-226ENST00000483656 ATICP31939 592 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 USP8P40818 1118 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 MAGEA1P43355 309 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 ASPAP45381 313 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 GJA8P48165 433 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 AFF1P51825 1210 aaKnown RBP10.84□□□□□ -0.67
HDAC6-226ENST00000483656 KRT83P78385 493 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 RBP5P82980 135 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 SOX4Q06945 474 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-226ENST00000483656 TCTN1Q2MV58 587 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 AGMOQ6ZNB7 445 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 ZNF662Q6ZS27 426 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 LRRC8DQ7L1W4 858 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 ANKRD33Q7Z3H0 272 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 NOP9Q86U38 636 aaKnown RBP10.84□□□□□ -0.67
HDAC6-226ENST00000483656 SLC47A2Q86VL8 602 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 PALB2Q86YC2 1186 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 GSTCDQ8NEC7 633 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 EPS8L1Q8TE68 723 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 DDX1Q92499 740 aaKnown RBP10.84□□□□□ -0.67
HDAC6-226ENST00000483656 LPPQ93052 612 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 C16orf45Q96MC5 204 aaPredicted RBP10.84□□□□□ -0.67
HDAC6-226ENST00000483656 ZFP42Q96MM3 310 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 TSPAN18Q96SJ8 248 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 AGPAT1Q99943 283 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 ADAM2Q99965 735 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 SDCBP2Q9H190 292 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 DEF6Q9H4E7 631 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 MIOSQ9NXC5 875 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 TRIM10Q9UDY6 481 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 ITGA11Q9UKX5 1188 aa10.84□□□□□ -0.67
HDAC6-226ENST00000483656 PDCD11Q14690 1871 aaKnown RBP10.83□□□□□ -0.68
HDAC6-226ENST00000483656 A0A0U1RQF3 1178 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 ANO9A1A5B4 782 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 FANCGO15287 622 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 PJA2O43164 708 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 PQBP1O60828 265 aaKnown RBP10.83□□□□□ -0.68
HDAC6-226ENST00000483656 WEE2P0C1S8 567 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 CCDC172P0C7W6 258 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 KRT5P13647 590 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 CYP11B1P15538 503 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 VAV2P52735 878 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 ZNF132P52740 706 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 TLE2Q04725 743 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 FAAP100Q0VG06 881 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 BFSP2Q13515 415 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 BMS1Q14692 1282 aaKnown RBP10.83□□□□□ -0.68
HDAC6-226ENST00000483656 SPA17Q15506 151 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 PTPN14Q15678 1187 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 NAB2Q15742 525 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 TRIM60Q495X7 471 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 PRPF38BQ5VTL8 546 aaKnown RBP10.83□□□□□ -0.68
HDAC6-226ENST00000483656 C1orf53Q5VUE5 145 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 C9orf57Q5W0N0 161 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 ZNF598Q86UK7 904 aaKnown RBP10.83□□□□□ -0.68
HDAC6-226ENST00000483656 DNAAF5Q86Y56 855 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 FMNL3Q8IVF7 1028 aa10.83□□□□□ -0.68
HDAC6-226ENST00000483656 GLYCTKQ8IVS8 523 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms