RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 PIDD1Q9HB75 910 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 KCNH3Q9ULD8 1083 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 C2CD2Q9Y426 696 aa12.91□□□□□ -0.34
HMGN1-213ENST00000482192 PRR33A8MZF0 331 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 C8AP07357 584 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 NFICP08651 508 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 HNRNPA1P09651 372 aaKnown RBP eCLIP12.9□□□□□ -0.34
HMGN1-213ENST00000482192 HOXA9P31269 272 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 PTPN21Q16825 1174 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 SLC8B1Q6J4K2 584 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 OTOP3Q7RTS5 596 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 CEP57L1Q8IYX8 460 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 ZDHHC14Q8IZN3 488 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 APPL2Q8NEU8 664 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 LEO1Q8WVC0 666 aaPredicted RBP12.9□□□□□ -0.34
HMGN1-213ENST00000482192 EDAQ92838 391 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 FGFBP2Q9BYJ0 223 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 PRKD2Q9BZL6 878 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 WDR6Q9NNW5 1121 aaKnown RBP12.9□□□□□ -0.34
HMGN1-213ENST00000482192 PCDHB8Q9UN66 801 aa12.9□□□□□ -0.34
HMGN1-213ENST00000482192 CLUHO75153 1309 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 M0QZQ0 153 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 PRPF6O94906 941 aaKnown RBP12.89□□□□□ -0.35
HMGN1-213ENST00000482192 IL18RAPO95256 599 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 LDHAP00338 332 aaKnown RBP12.89□□□□□ -0.35
HMGN1-213ENST00000482192 GARTP22102 1010 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 PAX3P23760 479 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 CMA1P23946 247 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 AARSP49588 968 aaKnown RBP eCLIP12.89□□□□□ -0.35
HMGN1-213ENST00000482192 ROR1Q01973 937 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 MRPL58Q14197 206 aaKnown RBP12.89□□□□□ -0.35
HMGN1-213ENST00000482192 FAM26FQ5R3K3 315 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 PPM1LQ5SGD2 360 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 ZNF280DQ6N043 979 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 CRELD2Q6UXH1 353 aaPredicted RBP12.89□□□□□ -0.35
HMGN1-213ENST00000482192 RSPO2Q6UXX9 243 aaPredicted RBP12.89□□□□□ -0.35
HMGN1-213ENST00000482192 RTL10Q7L3V2 364 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 NT5DC4Q86YG4 428 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 SLC7A14Q8TBB6 771 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 HPS3Q969F9 1004 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 FAM213AQ9BRX8 229 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 CITO14578 2027 aa12.89□□□□□ -0.35
HMGN1-213ENST00000482192 PVALEFA0A1B0GWK0 134 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 KIAA0391O15091 583 aaKnown RBP12.88□□□□□ -0.35
HMGN1-213ENST00000482192 EIF3DO15371 548 aaKnown RBP eCLIP12.88□□□□□ -0.35
HMGN1-213ENST00000482192 TBC1D4O60343 1298 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 XYLBO75191 536 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 SLFN14P0C7P3 912 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 PFKFB1P16118 471 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 KCNA4P22459 653 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 GUCY2FP51841 1108 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 ZXDAP98168 799 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 YWHAHQ04917 246 aaPredicted RBP12.88□□□□□ -0.35
HMGN1-213ENST00000482192 MTMR3Q13615 1198 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 UVSSAQ2YD98 709 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 CTXN3Q4LDR2 81 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 C9orf57Q5W0N0 161 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 ARMCX5Q6P1M9 558 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 DSTYKQ6XUX3 929 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 UNC13DQ70J99 1090 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 TMEM130Q8N3G9 435 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 GLIS3Q8NEA6 775 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 ZNF461Q8TAF7 563 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 SAAL1Q96ER3 474 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 CBWD1Q9BRT8 395 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 OXCT2Q9BYC2 517 aaPredicted RBP12.88□□□□□ -0.35
HMGN1-213ENST00000482192 SCAND2PQ9GZW5 306 aaPredicted RBP12.88□□□□□ -0.35
HMGN1-213ENST00000482192 BLZF1Q9H2G9 400 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 RBAKQ9NYW8 714 aaPredicted RBP12.88□□□□□ -0.35
HMGN1-213ENST00000482192 USP25Q9UHP3 1055 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 FBXL5Q9UKA1 691 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 SORCS3Q9UPU3 1222 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 PDCD11Q14690 1871 aaKnown RBP12.88□□□□□ -0.35
HMGN1-213ENST00000482192 DENND4AQ7Z401 1863 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 NCOR1O75376 2440 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 VWA8A3KMH1 1905 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 UBE4BO95155 1302 aa12.88□□□□□ -0.35
HMGN1-213ENST00000482192 ANO9A1A5B4 782 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 ARHGEF37A1IGU5 675 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 WDR27A2RRH5 827 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 PIRO00625 290 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 ACTN4O43707 911 aaKnown RBP12.87□□□□□ -0.35
HMGN1-213ENST00000482192 EXTL3O43909 919 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 ABLIM3O94929 683 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 OAZ2O95190 189 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 POU2F2P09086 479 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 COL9A1P20849 921 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 AFMP43652 599 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 ARPP19P56211 112 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 LILRA4P59901 499 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 EHHADHQ08426 723 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 TRIM67Q6ZTA4 783 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 EPM2AIP1Q7L775 607 aaPredicted RBP12.87□□□□□ -0.35
HMGN1-213ENST00000482192 USP37Q86T82 979 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 BRSK2Q8IWQ3 736 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 UBALD2Q8IYN6 164 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 GPD1LQ8N335 351 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 ZNF507Q8TCN5 953 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 CHAMP1Q96JM3 812 aa12.87□□□□□ -0.35
HMGN1-213ENST00000482192 DPP3Q9NY33 737 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms