RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 DNMT3LQ9UJW3 386 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 STK24Q9Y6E0 443 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 PTPRBP23467 1997 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 BOD1L1Q8NFC6 3051 aa13.23□□□□□ -0.29
USP11-208ENST00000480104 TEX51A0A1B0GUA7 166 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 A0A1W2PRU2 124 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 DPYSL4O14531 572 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 CHMP2AO43633 222 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 DDAH1O94760 285 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 ABLIM3O94929 683 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 STBD1O95210 358 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 IGFBP6P24592 240 aaPredicted RBP13.22□□□□□ -0.29
USP11-208ENST00000480104 ADCY7P51828 1080 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 PLCB2Q00722 1185 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 SART3Q15020 963 aaKnown RBP13.22□□□□□ -0.29
USP11-208ENST00000480104 XKR3Q5GH77 459 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 COLEC12Q5KU26 742 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 NAIF1Q69YI7 327 aaPredicted RBP13.22□□□□□ -0.29
USP11-208ENST00000480104 WWC2Q6AWC2 1192 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 ANO7Q6IWH7 933 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 NAXDQ8IW45 347 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 ZNF654Q8IZM8 581 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 LEMD2Q8NC56 503 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 ACDQ96AP0 544 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 ZNF512Q96ME7 567 aaPredicted RBP13.22□□□□□ -0.29
USP11-208ENST00000480104 DSCC1Q9BVC3 393 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 PARP2Q9UGN5 583 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 SLC6A14Q9UN76 642 aa13.22□□□□□ -0.29
USP11-208ENST00000480104 COL5A1P20908 1838 aaPredicted RBP13.22□□□□□ -0.29
USP11-208ENST00000480104 ITPR3Q14573 2671 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 PRAMEF12O95522 483 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 ATF2P15336 505 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 ITPKAP23677 461 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 U2AF2P26368 475 aaKnown RBP eCLIP13.21□□□□□ -0.29
USP11-208ENST00000480104 GNAQP50148 359 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 NAPAP54920 295 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 ARPP19P56211 112 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 LAMTOR4Q0VGL1 99 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 TWF1Q12792 350 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 TRDNQ13061 729 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 AP3B2Q13367 1082 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 CAMK2BQ13554 666 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 PEAR1Q5VY43 1037 aaPredicted RBP13.21□□□□□ -0.29
USP11-208ENST00000480104 LYSMD4Q5XG99 296 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 SLC8B1Q6J4K2 584 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 ANKS3Q6ZW76 656 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 GPR155Q7Z3F1 870 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 KRT25Q7Z3Z0 450 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 CCDC82Q8N4S0 544 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 PRPF31Q8WWY3 499 aaKnown RBP13.21□□□□□ -0.29
USP11-208ENST00000480104 CRYGNQ8WXF5 182 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 FNBP1Q96RU3 617 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 CAPN10Q9HC96 672 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 DNAAF2Q9NVR5 837 aaKnown RBP13.21□□□□□ -0.29
USP11-208ENST00000480104 PILRBQ9UKJ0 227 aa13.21□□□□□ -0.29
USP11-208ENST00000480104 PCDH15Q96QU1 1955 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 B8ZZF3 427 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 SLC28A2O43868 658 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 RXRAP19793 462 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 AXLP30530 894 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 PTPAQ15257 358 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 DUOXA1Q1HG43 343 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 TAF1BQ53T94 588 aaPredicted RBP13.2□□□□□ -0.3
USP11-208ENST00000480104 PRR16Q569H4 304 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 PLA2G4FQ68DD2 849 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 CWC27Q6UX04 472 aaKnown RBP13.2□□□□□ -0.3
USP11-208ENST00000480104 RASSF3Q86WH2 238 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 RNF149Q8NC42 400 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 MDGA1Q8NFP4 955 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 PSPC1Q8WXF1 523 aaKnown RBP13.2□□□□□ -0.3
USP11-208ENST00000480104 RLN3Q8WXF3 142 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 TMEM143Q96AN5 459 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 CNOT6LQ96LI5 555 aaKnown RBP13.2□□□□□ -0.3
USP11-208ENST00000480104 ARID3AQ99856 593 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 SEMA4CQ9C0C4 833 aa13.2□□□□□ -0.3
USP11-208ENST00000480104 CIZ1Q9ULV3 898 aaPredicted RBP13.2□□□□□ -0.3
USP11-208ENST00000480104 KIF26AQ9ULI4 1882 aaPredicted RBP13.2□□□□□ -0.3
USP11-208ENST00000480104 MUC22E2RYF6 1773 aaPredicted RBP13.2□□□□□ -0.3
USP11-208ENST00000480104 ADAMTS9Q9P2N4 1935 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 FBN2P35556 2912 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 C2CD3Q4AC94 2353 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 TNRC6BQ9UPQ9 1833 aaKnown RBP13.19□□□□□ -0.3
USP11-208ENST00000480104 FAM149AA5PLN7 773 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 OTOL1A6NHN0 477 aaPredicted RBP13.19□□□□□ -0.3
USP11-208ENST00000480104 DDX11L8A8MPP1 907 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 I3L4J1 428 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 PTGESO14684 152 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 NPTXRO95502 500 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 CYP3A4P08684 503 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 SERPINF2P08697 491 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 CALM1P0DP23 149 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 CALM2P0DP24 149 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 CALM3P0DP25 149 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 SDSP20132 328 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 DRD1P21728 446 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 HOXD12P35452 270 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 EIF2S3P41091 472 aaKnown RBP13.19□□□□□ -0.3
USP11-208ENST00000480104 DPP6P42658 865 aa13.19□□□□□ -0.3
USP11-208ENST00000480104 CLK2P49760 499 aaKnown RBP13.19□□□□□ -0.3
USP11-208ENST00000480104 CSRP3P50461 194 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms