RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 BRAFP15056 766 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 KCNA3P22001 575 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 CRKP46108 304 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 PSMD7P51665 324 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 VAMP7P51809 220 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 COPS2P61201 443 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 PLOD1Q02809 727 aaPredicted RBP11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 MPP2Q14168 576 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 ABCB5Q2M3G0 1257 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 CNPY1Q3B7I2 92 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 HP1BP3Q5SSJ5 553 aaPredicted RBP11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 CAPN12Q6ZSI9 719 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 STXBP4Q6ZWJ1 553 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 CCNJLQ8IV13 435 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 SLC17A8Q8NDX2 589 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 SNRNP27Q8WVK2 155 aaKnown RBP11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 WDR60Q8WVS4 1066 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 CRAMP1Q96RY5 1269 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 MKNK1Q9BUB5 465 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 STMN4Q9H169 189 aaPredicted RBP11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 RNPEPL1Q9HAU8 725 aa11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 CNOT7Q9UIV1 285 aaKnown RBP11.73□□□□□ -0.53
LRRFIP1-211ENST00000478958 GSTTP1A0A1W2PQM5 241 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 TRIM43BA6NCK2 446 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 PPEF1O14829 653 aaPredicted RBP11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 THAP12O43422 761 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 SUN1O94901 812 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 ECE1P42892 770 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 CRY2Q49AN0 593 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 SLC44A4Q53GD3 710 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 MIGA2Q7L4E1 593 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 ZNF554Q86TJ5 538 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 CYP4X1Q8N118 509 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 EPS8L1Q8TE68 723 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 DHX38Q92620 1227 aaKnown RBP11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 ART4Q93070 314 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 C9orf72Q96LT7 481 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 NR1H4Q96RI1 486 aaPredicted RBP11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 ZNF577Q9BSK1 485 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 ARHGEF3Q9NR81 526 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 LRRC4BQ9NT99 713 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 DMAC2Q9NW81 257 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 ARFGEF1Q9Y6D6 1849 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 A0A1W2PRG0 241 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 STX2P32856 288 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 HOXD12P35452 270 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 MXI1P50539 228 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 RRP1BQ14684 758 aaKnown RBP11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 SPDYCQ5MJ68 293 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 RBM26Q5T8P6 1007 aaKnown RBP11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 CYP4F22Q6NT55 531 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 C11orf63Q6NUN7 778 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 VSTM1Q6UX27 236 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 GET4Q7L5D6 327 aaPredicted RBP11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 SH3BP5LQ7L8J4 393 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 IQCF2Q8IXL9 164 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 SLC15A3Q8IY34 581 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 DAW1Q8N136 415 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 FITM2Q8N6M3 262 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 TGS1Q96RS0 853 aaKnown RBP11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 COA1Q9GZY4 146 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 AAASQ9NRG9 546 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 NYAP2Q9P242 653 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 PRR12Q9ULL5 1215 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 SMCHD1A6NHR9 2005 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 CDK5RAP2Q96SN8 1893 aa11.72□□□□□ -0.53
LRRFIP1-211ENST00000478958 TOM1O60784 492 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 PSMD10O75832 226 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 GYS1P13807 737 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 CHRNB2P17787 502 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 SSTR3P32745 418 aaPredicted RBP11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 CIITAP33076 1130 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 ADCY8P40145 1251 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 PRELPP51888 382 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 SH3BGRP55822 239 aaPredicted RBP11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 RCN2Q14257 317 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 PLEKHO2Q8TD55 490 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 AZIN2Q96A70 460 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 PPP1R14BQ96C90 147 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 NACC1Q96RE7 527 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 TIPINQ9BVW5 301 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 GPRC5CQ9NQ84 441 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 PI4KBQ9UBF8 816 aa11.71□□□□□ -0.53
LRRFIP1-211ENST00000478958 SBF2Q86WG5 1849 aa11.71□□□□□ -0.54
LRRFIP1-211ENST00000478958 HSPA6P17066 643 aa11.71□□□□□ -0.54
LRRFIP1-211ENST00000478958 ITGA8P53708 1063 aa11.71□□□□□ -0.54
LRRFIP1-211ENST00000478958 PADI6Q6TGC4 694 aa11.71□□□□□ -0.54
LRRFIP1-211ENST00000478958 STK32AQ8WU08 396 aa11.71□□□□□ -0.54
LRRFIP1-211ENST00000478958 RUNDC3BQ96NL0 473 aa11.71□□□□□ -0.54
LRRFIP1-211ENST00000478958 RAB3IPQ96QF0 476 aaPredicted RBP11.71□□□□□ -0.54
LRRFIP1-211ENST00000478958 WNT8AQ9H1J5 351 aa11.71□□□□□ -0.54
LRRFIP1-211ENST00000478958 TOPORSQ9NS56 1045 aaPredicted RBP11.71□□□□□ -0.54
LRRFIP1-211ENST00000478958 UBAP1Q9NZ09 502 aa11.71□□□□□ -0.54
LRRFIP1-211ENST00000478958 ANAPC7Q9UJX3 599 aa11.71□□□□□ -0.54
LRRFIP1-211ENST00000478958 RGL2O15211 777 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 CYP3A4P08684 503 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 KRT5P13647 590 aa11.7□□□□□ -0.54
LRRFIP1-211ENST00000478958 CCNFP41002 786 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms