RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 POMKQ9H5K3 350 aa12.52□□□□□ -0.4
HLA-DOB-208ENST00000475235 MYO7AQ13402 2215 aa12.52□□□□□ -0.4
HLA-DOB-208ENST00000475235 PODXLO00592 558 aa12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 F13A1P00488 732 aa12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 PSMD5Q16401 504 aa12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 SLC10A6Q3KNW5 377 aa12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 DYMQ7RTS9 669 aa12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 SPRYD3Q8NCJ5 442 aa12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 ATL2Q8NHH9 583 aa12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 LNX1Q8TBB1 728 aaPredicted RBP12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 KCNG4Q8TDN1 519 aa12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 ZMAT2Q96NC0 199 aaKnown RBP12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 CUEDC2Q9H467 287 aa12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 TFIP11Q9UBB9 837 aaKnown RBP12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 MUTYHQ9UIF7 546 aa12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 CFAP45Q9UL16 551 aa12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 USTQ9Y2C2 406 aa12.52□□□□□ -0.41
HLA-DOB-208ENST00000475235 BDP1A6H8Y1 2624 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 ANKRD33BA6NCL7 494 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 MYMKA6NI61 221 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 PRR33A8MZF0 331 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 OGTO15294 1046 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 TGM5O43548 720 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 XPOTO43592 962 aaKnown RBP12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 CUTAO60888 179 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 SETSIPP0DME0 302 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 FGFR3P22607 806 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 NMT1P30419 496 aaKnown RBP12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 PPP2R3AQ06190 1150 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 SOX4Q06945 474 aaPredicted RBP12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 SLFN12LQ6IEE8 588 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 PRSS55Q6UWB4 352 aaPredicted RBP12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 CCDC149Q6ZUS6 474 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 ZNF720Q7Z2F6 126 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 SFR1Q86XK3 245 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 PALB2Q86YC2 1186 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 CD302Q8IX05 232 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 LRFN3Q9BTN0 628 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 MSTO1Q9BUK6 570 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 GOLGA2P5Q9HBQ8 144 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 ZDHHC7Q9NXF8 308 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 EXOC7Q9UPT5 735 aa12.51□□□□□ -0.41
HLA-DOB-208ENST00000475235 A0A0B4J269 797 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 TTC26A0AVF1 554 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 CCDC189A1A4V9 331 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 WEE2P0C1S8 567 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 CXCL8P10145 99 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 CYP3A5P20815 502 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 PAX7P23759 505 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 ALCAMQ13740 583 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 SEZ6Q53EL9 994 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 ZFYVE27Q5T4F4 411 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 LILRA6Q6PI73 481 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 ANKS3Q6ZW76 656 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 PDILTQ8N807 584 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 TDRD5Q8NAT2 981 aaKnown RBP12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 KREMEN2Q8NCW0 462 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 STAMQ92783 540 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 EDAQ92838 391 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 ACSF2Q96CM8 615 aaPredicted RBP12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 DNAJC19Q96DA6 116 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 CLSTN3Q9BQT9 956 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 PANK2Q9BZ23 570 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 HAPLN2Q9GZV7 340 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 TNMDQ9H2S6 317 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 MRPL44Q9H9J2 332 aaKnown RBP12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 RPF1Q9H9Y2 349 aaKnown RBP12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 C11orf16Q9NQ32 467 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 OLFML3Q9NRN5 406 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 MTRRQ9UBK8 725 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 CDH22Q9UJ99 828 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 UBQLN1Q9UMX0 589 aaKnown RBP12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 PCDHB8Q9UN66 801 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 BACE2Q9Y5Z0 518 aa12.5□□□□□ -0.41
HLA-DOB-208ENST00000475235 CCDC195A0A1B0GUA6 201 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 FRMD3A2A2Y4 597 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 RIOK3O14730 519 aaKnown RBP12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 SYN3O14994 580 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 MEFVO15553 781 aaPredicted RBP12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 PAPLNO95428 1278 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 IDEP14735 1019 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 RPL17P18621 184 aaKnown RBP12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 COL9A1P20849 921 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 AMPD3Q01432 767 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 POU5F1Q01860 360 aaKnown RBP12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 POSTNQ15063 836 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 ZC2HC1CQ53FD0 456 aaPredicted RBP12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 LIN9Q5TKA1 542 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 KANK3Q6NY19 840 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 CD300LGQ6UXG3 332 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 MAMSTRQ6ZN01 415 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 OTOP3Q7RTS5 596 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 GLYCTKQ8IVS8 523 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 ZDHHC14Q8IZN3 488 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 IQUBQ8NA54 791 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 C3orf58Q8NDZ4 430 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 C18orf25Q96B23 403 aaPredicted RBP12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 RNF25Q96BH1 459 aaPredicted RBP12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 STYXL1Q9Y6J8 313 aa12.49□□□□□ -0.41
HLA-DOB-208ENST00000475235 A0A087X0B3 334 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms