RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 GPR161Q8N6U8 529 aaKnown RBP19.29■□□□□ 0.68
VARS2-206ENST00000473916 CPA5Q8WXQ8 436 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 CAPNS2Q96L46 248 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 FAM81BQ96LP2 452 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 GCOM2Q9BZD3 368 aaPredicted RBP19.29■□□□□ 0.68
VARS2-206ENST00000473916 RNF19AQ9NV58 838 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 HES2Q9Y543 173 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 PCDHB2Q9Y5E7 798 aa19.29■□□□□ 0.68
VARS2-206ENST00000473916 KIF4AO95239 1232 aa19.28■□□□□ 0.68
VARS2-206ENST00000473916 DARSP14868 501 aaKnown RBP19.28■□□□□ 0.68
VARS2-206ENST00000473916 ASPAP45381 313 aa19.28■□□□□ 0.68
VARS2-206ENST00000473916 RAP1GAPP47736 663 aa19.28■□□□□ 0.68
VARS2-206ENST00000473916 RNASE9P60153 205 aaKnown RBP19.28■□□□□ 0.68
VARS2-206ENST00000473916 ZNF394Q53GI3 561 aa19.28■□□□□ 0.68
VARS2-206ENST00000473916 LLGL2Q6P1M3 1020 aa19.28■□□□□ 0.68
VARS2-206ENST00000473916 NT5DC3Q86UY8 548 aa19.28■□□□□ 0.68
VARS2-206ENST00000473916 CXorf38Q8TB03 319 aa19.28■□□□□ 0.68
VARS2-206ENST00000473916 NIF3L1Q9GZT8 377 aa19.28■□□□□ 0.68
VARS2-206ENST00000473916 ZNF446Q9NWS9 450 aa19.28■□□□□ 0.68
VARS2-206ENST00000473916 RNF186Q9NXI6 227 aa19.28■□□□□ 0.68
VARS2-206ENST00000473916 CTTNBP2NLQ9P2B4 639 aa19.28■□□□□ 0.68
VARS2-206ENST00000473916 STXBP5LQ9Y2K9 1186 aa19.28■□□□□ 0.68
VARS2-206ENST00000473916 RALGAPA2Q2PPJ7 1873 aa19.28■□□□□ 0.68
VARS2-206ENST00000473916 C17orf102A2RUQ5 167 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 ITGB3P05106 788 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 GNA15P30679 374 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 GPC5P78333 572 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 CACNB2Q08289 660 aaPredicted RBP19.27■□□□□ 0.68
VARS2-206ENST00000473916 NOGQ13253 232 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 SGSM1Q2NKQ1 1148 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 MFSD14CQ5VZR4 134 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 PEX26Q7Z412 305 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 PHLDB2Q86SQ0 1253 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 CPNE8Q86YQ8 564 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 BTBD6Q96KE9 485 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 NXF1Q9UBU9 619 aaKnown RBP19.27■□□□□ 0.68
VARS2-206ENST00000473916 TSKSQ9UJT2 592 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 CNTN6Q9UQ52 1028 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 SCN1AP35498 2009 aa19.27■□□□□ 0.68
VARS2-206ENST00000473916 UNGP13051 313 aaPredicted RBP19.27■□□□□ 0.67
VARS2-206ENST00000473916 CCND3P30281 292 aaPredicted RBP19.27■□□□□ 0.67
VARS2-206ENST00000473916 MRPS25P82663 173 aaKnown RBP19.27■□□□□ 0.67
VARS2-206ENST00000473916 RPS6KA1Q15418 735 aa19.27■□□□□ 0.67
VARS2-206ENST00000473916 NAA35Q5VZE5 725 aa19.27■□□□□ 0.67
VARS2-206ENST00000473916 MROH7Q68CQ1 1323 aa19.27■□□□□ 0.67
VARS2-206ENST00000473916 ACAD10Q6JQN1 1059 aa19.27■□□□□ 0.67
VARS2-206ENST00000473916 C7orf31Q8N865 590 aa19.27■□□□□ 0.67
VARS2-206ENST00000473916 ZNF653Q96CK0 615 aa19.27■□□□□ 0.67
VARS2-206ENST00000473916 CYFIP2Q96F07 1278 aa19.27■□□□□ 0.67
VARS2-206ENST00000473916 CISHQ9NSE2 258 aa19.27■□□□□ 0.67
VARS2-206ENST00000473916 KCNK3O14649 394 aa19.26■□□□□ 0.67
VARS2-206ENST00000473916 ALDH1A1P00352 501 aa19.26■□□□□ 0.67
VARS2-206ENST00000473916 HOXC8P31273 242 aa19.26■□□□□ 0.67
VARS2-206ENST00000473916 ZNF132P52740 706 aa19.26■□□□□ 0.67
VARS2-206ENST00000473916 GJA9P57773 515 aa19.26■□□□□ 0.67
VARS2-206ENST00000473916 SNX17Q15036 470 aa19.26■□□□□ 0.67
VARS2-206ENST00000473916 ACAP3Q96P50 834 aa19.26■□□□□ 0.67
VARS2-206ENST00000473916 ZSWIM1Q9BR11 485 aa19.26■□□□□ 0.67
VARS2-206ENST00000473916 ADPGKQ9BRR6 497 aa19.26■□□□□ 0.67
VARS2-206ENST00000473916 KATNAL1Q9BW62 490 aa19.26■□□□□ 0.67
VARS2-206ENST00000473916 ABCB6Q9NP58 842 aa19.26■□□□□ 0.67
VARS2-206ENST00000473916 SNTG2Q9NY99 539 aa19.26■□□□□ 0.67
VARS2-206ENST00000473916 TMEM110-MUSTN1A8MSY1 372 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 TOMM70O94826 608 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 MYCNP04198 464 aaPredicted RBP19.25■□□□□ 0.67
VARS2-206ENST00000473916 EIF4BP23588 611 aaKnown RBP19.25■□□□□ 0.67
VARS2-206ENST00000473916 CCDC181Q5TID7 509 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 SPATA4Q8NEY3 305 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 SDCBP2Q9H190 292 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 NXF3Q9H4D5 531 aaKnown RBP19.25■□□□□ 0.67
VARS2-206ENST00000473916 PDCD11Q14690 1871 aaKnown RBP19.25■□□□□ 0.67
VARS2-206ENST00000473916 THAP12O43422 761 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 SEC31AO94979 1220 aaKnown RBP19.25■□□□□ 0.67
VARS2-206ENST00000473916 CDH8P55286 799 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 ORC1Q13415 861 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 TMEM132DQ14C87 1099 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 DEFB115Q30KQ5 88 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 NBPF20Q3BBV1 942 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 ZNF572Q7Z3I7 529 aaPredicted RBP19.25■□□□□ 0.67
VARS2-206ENST00000473916 MSANTD4Q8NCY6 345 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 WNT8BQ93098 351 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 HINFPQ9BQA5 517 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 NUP85Q9BW27 656 aa19.25■□□□□ 0.67
VARS2-206ENST00000473916 CYP1A2P05177 515 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 BRD2P25440 801 aaKnown RBP19.24■□□□□ 0.67
VARS2-206ENST00000473916 POLR2BP30876 1174 aaKnown RBP19.24■□□□□ 0.67
VARS2-206ENST00000473916 GRM5P41594 1212 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 BPIFB4P59827 614 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 WDR72Q3MJ13 1102 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 SLC27A1Q6PCB7 646 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 RHOT2Q8IXI1 618 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 HES6Q96HZ4 224 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 ZMAT2Q96NC0 199 aaKnown RBP19.24■□□□□ 0.67
VARS2-206ENST00000473916 ASB7Q9H672 318 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 SMYD3Q9H7B4 428 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 RBM12Q9NTZ6 932 aaKnown RBP19.24■□□□□ 0.67
VARS2-206ENST00000473916 SEPT4O43236 478 aa19.24■□□□□ 0.67
VARS2-206ENST00000473916 CYP1A1P04798 512 aaPredicted RBP19.24■□□□□ 0.67
VARS2-206ENST00000473916 PRKAR2AP13861 404 aaKnown RBP19.24■□□□□ 0.67
VARS2-206ENST00000473916 VSNL1P62760 191 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms