RNA–Protein interactions for RNA: ENST00000473783.5

SSBP1-209, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-209ENST00000473783 NPTXRO95502 500 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 MYL4P12829 197 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 PLCB2Q00722 1185 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 MBTD1Q05BQ5 628 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 SEMA3BQ13214 749 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 MXD4Q14582 209 aaPredicted RBP11.65□□□□□ -0.54
SSBP1-209ENST00000473783 PTPAQ15257 358 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 TEAD2Q15562 447 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 NAB2Q15742 525 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 TMEM196Q5HYL7 178 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 HS6ST3Q8IZP7 471 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 CCDC12Q8WUD4 166 aaPredicted RBP11.65□□□□□ -0.54
SSBP1-209ENST00000473783 RUFY2Q8WXA3 655 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 CEP170P1Q96L14 293 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 HHIPQ96QV1 700 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 UBL7Q96S82 380 aaPredicted RBP11.65□□□□□ -0.54
SSBP1-209ENST00000473783 SNTG2Q9NY99 539 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 MYO16Q9Y6X6 1858 aa11.65□□□□□ -0.54
SSBP1-209ENST00000473783 A0A1B0GUA9 196 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 B3GAT3O94766 335 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 APBB3O95704 486 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 PLA2G2AP14555 144 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 GJA1P17302 382 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 TKTP29401 623 aaKnown RBP11.64□□□□□ -0.55
SSBP1-209ENST00000473783 GNA11P29992 359 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 USP11P51784 963 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 GRSF1Q12849 480 aaKnown RBP eCLIP11.64□□□□□ -0.55
SSBP1-209ENST00000473783 TFDP1Q14186 410 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 EMC2Q15006 297 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 RTN1Q16799 776 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 ITPRIPL2Q3MIP1 535 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 TPGS2Q68CL5 300 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 APOA5Q6Q788 366 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
SSBP1-209ENST00000473783 TTC8Q8TAM2 541 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 SHKBP1Q8TBC3 707 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 GJA10Q969M2 543 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 NUSAP1Q9BXS6 441 aaKnown RBP11.64□□□□□ -0.55
SSBP1-209ENST00000473783 OBP2AQ9NY56 170 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 CEP72Q9P209 647 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 PTPRBP23467 1997 aa11.64□□□□□ -0.55
SSBP1-209ENST00000473783 GOLGA4Q13439 2230 aaKnown RBP11.64□□□□□ -0.55
SSBP1-209ENST00000473783 PTPN13Q12923 2485 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 PTPRDP23468 1912 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 ADAMTS9Q9P2N4 1935 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 DPYSL4O14531 572 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 ADAMTS3O15072 1205 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 SEC24AO95486 1093 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 PRKCBP05771 671 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 QARSP47897 775 aaKnown RBP11.63□□□□□ -0.55
SSBP1-209ENST00000473783 HNRNPDQ14103 355 aaKnown RBP11.63□□□□□ -0.55
SSBP1-209ENST00000473783 PFKFB3Q16875 520 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-209ENST00000473783 TRIM61Q5EBN2 209 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 FSTL4Q6MZW2 842 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 SYT13Q7L8C5 426 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 ARID3BQ8IVW6 561 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-209ENST00000473783 BICD2Q8TD16 824 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 ZFYVE19Q96K21 471 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 NFKBIZQ9BYH8 718 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 IGSF5Q9NSI5 407 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 BMP2KQ9NSY1 1161 aaPredicted RBP11.63□□□□□ -0.55
SSBP1-209ENST00000473783 MAFFQ9ULX9 164 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 RAXQ9Y2V3 346 aa11.63□□□□□ -0.55
SSBP1-209ENST00000473783 COL6A6A6NMZ7 2263 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 PTPRQQ9UMZ3 2332 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 TRDMT1O14717 391 aaKnown RBP11.62□□□□□ -0.55
SSBP1-209ENST00000473783 B4GALT5O43286 388 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 EDIL3O43854 480 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 RNF40O75150 1001 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 C1QL1O75973 258 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 PRB1P04280 392 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 MAPK8P45983 427 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 TNK2Q07912 1038 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 TWF1Q12792 350 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 Q4G0T1 1027 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 FBXO43Q4G163 708 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 USP39Q53GS9 565 aaKnown RBP11.62□□□□□ -0.55
SSBP1-209ENST00000473783 CCNI2Q6ZMN8 369 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-209ENST00000473783 CHD1LQ86WJ1 897 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 CDR2LQ86X02 465 aaPredicted RBP11.62□□□□□ -0.55
SSBP1-209ENST00000473783 LURAP1LQ8IV03 231 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 ACDQ96AP0 544 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 UROC1Q96N76 676 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 MTRQ99707 1265 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 DKK4Q9UBT3 224 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 TPCN1Q9ULQ1 816 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 PLXND1Q9Y4D7 1925 aa11.62□□□□□ -0.55
SSBP1-209ENST00000473783 ZNF638Q14966 1978 aaKnown RBP11.61□□□□□ -0.55
SSBP1-209ENST00000473783 A0A1W2PRU2 124 aa11.61□□□□□ -0.55
SSBP1-209ENST00000473783 H7C4K7 107 aa11.61□□□□□ -0.55
SSBP1-209ENST00000473783 RECQL4O94761 1208 aa11.61□□□□□ -0.55
SSBP1-209ENST00000473783 ENGP17813 658 aa11.61□□□□□ -0.55
SSBP1-209ENST00000473783 DGKEP52429 567 aa11.61□□□□□ -0.55
SSBP1-209ENST00000473783 ARPP19P56211 112 aa11.61□□□□□ -0.55
SSBP1-209ENST00000473783 ZNF605Q86T29 641 aa11.61□□□□□ -0.55
SSBP1-209ENST00000473783 SMC5Q8IY18 1101 aa11.61□□□□□ -0.55
SSBP1-209ENST00000473783 HDDC3Q8N4P3 179 aa11.61□□□□□ -0.55
SSBP1-209ENST00000473783 MDM1Q8TC05 714 aa11.61□□□□□ -0.55
SSBP1-209ENST00000473783 BPIFB1Q8TDL5 484 aa11.61□□□□□ -0.55
SSBP1-209ENST00000473783 ADAMTS14Q8WXS8 1223 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms