RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 TMEM150BA6NC51 233 aa15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 POLRMTO00411 1230 aaKnown RBP15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 UNGP13051 313 aaPredicted RBP15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 CALB2P22676 271 aa15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 PEX19P40855 299 aa15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 RAD23BP54727 409 aa15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 KLF1Q13351 362 aaPredicted RBP15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 LONP2Q86WA8 852 aa15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 ZCCHC9Q8N567 271 aaKnown RBP15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 ACER1Q8TDN7 264 aa15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 TMX4Q9H1E5 349 aaPredicted RBP15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 UBN1Q9NPG3 1134 aa15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 USTQ9Y2C2 406 aa15.11■□□□□ 0.01
NHLRC3-204ENST00000473371 PROSCO94903 275 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 ITGB5P18084 799 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 ADSSP30520 456 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 ABL2P42684 1182 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 RNASELQ05823 741 aaKnown RBP15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 HP1BP3Q5SSJ5 553 aaPredicted RBP15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 FAM102BQ5T8I3 360 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 C4orf33Q8N1A6 199 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 FAM13CQ8NE31 585 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 INPP5DQ92835 1189 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 MRRFQ96E11 262 aaKnown RBP15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 TRIM11Q96F44 468 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 SMC6Q96SB8 1091 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 KIF9Q9HAQ2 790 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 KIAA1586Q9HCI6 787 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 KCNH7Q9NS40 1196 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 PEX11AO75192 247 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 MYBL1P10243 752 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 CD58P19256 250 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 NSFP46459 744 aaKnown RBP15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 QARSP47897 775 aaKnown RBP15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 GRIK3Q13003 919 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 MOGSQ13724 837 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 CAPN12Q6ZSI9 719 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 RHOT1Q8IXI2 618 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 DENND1AQ8TEH3 1009 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 NUDCD1Q96RS6 583 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 OSBPL1AQ9BXW6 950 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 FOXP3Q9BZS1 431 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 ST6GALNAC4Q9H4F1 302 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 TDRD3Q9H7E2 651 aaKnown RBP15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 CYP39A1Q9NYL5 469 aa15.1■□□□□ 0.01
NHLRC3-204ENST00000473371 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 GNAZP19086 355 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 CA4P22748 312 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 SATB1Q01826 763 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 PKN2Q16513 984 aaKnown RBP15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 HHATQ5VTY9 493 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 PCNX4Q63HM2 1172 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 CDCA2Q69YH5 1023 aaPredicted RBP15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 SV2AQ7L0J3 742 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 STK32AQ8WU08 396 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 CHURC1Q8WUH1 139 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 RANBP17Q9H2T7 1088 aaKnown RBP15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 VPS37BQ9H9H4 285 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 PRPF4O43172 522 aaKnown RBP eCLIP15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 EDF1O60869 148 aaKnown RBP15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 FDX1P10109 184 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 GCAP28676 217 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 YWHABP31946 246 aaKnown RBP15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 PCK1P35558 622 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 RASSF2P50749 326 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 NCKAP1LP55160 1127 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 TAS2R40P59535 323 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 PTP4A2Q12974 167 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 ZFYVE27Q5T4F4 411 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 PODNQ7Z5L7 613 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 CSRNP1Q96S65 589 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 KIFC3Q9BVG8 833 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 TBC1D10AQ9BXI6 508 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 TBX20Q9UMR3 447 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 SMG5Q9UPR3 1016 aaKnown RBP15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 PSTPIP1O43586 416 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 KLRC2P26717 231 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 EPHB2P29323 1055 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 CNGA1P29973 690 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 ZYXQ15942 572 aaKnown RBP15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 PDK4Q16654 411 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 TEX9Q8N6V9 391 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 MRIQ9BWK5 157 aa15.09■□□□□ 0.01
NHLRC3-204ENST00000473371 H0Y3Z8 333 aa15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 CBX6O95503 412 aa15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 RPA3P35244 121 aaPredicted RBP15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 LIN9Q5TKA1 542 aa15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 USP37Q86T82 979 aa15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 LDHDQ86WU2 507 aa15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 TMC2Q8TDI7 906 aa15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 ZNF622Q969S3 477 aaKnown RBP eCLIP15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 TTC25Q96NG3 672 aa15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 C11orf70Q9BRQ4 267 aa15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 C1orf112Q9NSG2 853 aa15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 ZFATQ9P243 1243 aa15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 GRID1Q9ULK0 1009 aa15.08■□□□□ 0.01
NHLRC3-204ENST00000473371 ZMYND8Q9ULU4 1186 aaPredicted RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms