RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 ZNF131P52739 623 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 OSTNP61366 133 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 PRSS36Q5K4E3 855 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 MCTP1Q6DN14 999 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 IQCEQ6IPM2 695 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 ADSSL1Q8N142 457 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 ELMOD1Q8N336 334 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 DDX12PQ92771 950 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 E2F7Q96AV8 911 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 CDK5RAP3Q96JB5 506 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 TMX3Q96JJ7 454 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 TBC1D32Q96NH3 1257 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 TRPV4Q9HBA0 871 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 UBQLN1Q9UMX0 589 aaKnown RBP14.77□□□□□ -0.05
CHD3-207ENST00000466233 MYO15AQ9UKN7 3530 aa14.77□□□□□ -0.05
CHD3-207ENST00000466233 H3BQV1 296 aa14.76□□□□□ -0.05
CHD3-207ENST00000466233 MEFVO15553 781 aaPredicted RBP14.76□□□□□ -0.05
CHD3-207ENST00000466233 SP9P0CG40 484 aa14.76□□□□□ -0.05
CHD3-207ENST00000466233 MARCKSP29966 332 aaPredicted RBP14.76□□□□□ -0.05
CHD3-207ENST00000466233 MCM4P33991 863 aa14.76□□□□□ -0.05
CHD3-207ENST00000466233 SNW1Q13573 536 aaKnown RBP14.76□□□□□ -0.05
CHD3-207ENST00000466233 CTXN3Q4LDR2 81 aa14.76□□□□□ -0.05
CHD3-207ENST00000466233 ZBTB41Q5SVQ8 909 aa14.76□□□□□ -0.05
CHD3-207ENST00000466233 CYP4A22Q5TCH4 519 aa14.76□□□□□ -0.05
CHD3-207ENST00000466233 C1orf228Q6PIY5 440 aa14.76□□□□□ -0.05
CHD3-207ENST00000466233 ZNF852Q6ZMS4 543 aa14.76□□□□□ -0.05
CHD3-207ENST00000466233 HAUS6Q7Z4H7 955 aa14.76□□□□□ -0.05
CHD3-207ENST00000466233 CYP4F11Q9HBI6 524 aa14.76□□□□□ -0.05
CHD3-207ENST00000466233 ZFP14Q9HCL3 533 aa14.76□□□□□ -0.05
CHD3-207ENST00000466233 HCFC1R1Q9NWW0 138 aa14.76□□□□□ -0.05
CHD3-207ENST00000466233 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.76□□□□□ -0.05
CHD3-207ENST00000466233 INSL5Q9Y5Q6 135 aa14.76□□□□□ -0.05
CHD3-207ENST00000466233 VWA3AA6NCI4 1184 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 OR6C75A6NL08 312 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 SFI1A8K8P3 1242 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 I3L4J1 428 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 MAN2B1O00754 1011 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 DCNP07585 359 aaKnown RBP14.75□□□□□ -0.05
CHD3-207ENST00000466233 TYMPP19971 482 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 LONP1P36776 959 aaKnown RBP14.75□□□□□ -0.05
CHD3-207ENST00000466233 UBA7P41226 1012 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 YWHAHQ04917 246 aaPredicted RBP14.75□□□□□ -0.05
CHD3-207ENST00000466233 PLD1Q13393 1074 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 MYBPC2Q14324 1141 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 SLC5A9Q2M3M2 681 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 ARSHQ5FYA8 562 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 PDZD4Q76G19 769 aaPredicted RBP14.75□□□□□ -0.05
CHD3-207ENST00000466233 BRAPQ7Z569 592 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 DEPDC1BQ8WUY9 529 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 IRF7Q92985 503 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 C18orf25Q96B23 403 aaPredicted RBP14.75□□□□□ -0.05
CHD3-207ENST00000466233 CALML4Q96GE6 196 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 ZBTB45Q96K62 511 aaPredicted RBP14.75□□□□□ -0.05
CHD3-207ENST00000466233 ZNF512Q96ME7 567 aaPredicted RBP14.75□□□□□ -0.05
CHD3-207ENST00000466233 FAM126AQ9BYI3 521 aaPredicted RBP14.75□□□□□ -0.05
CHD3-207ENST00000466233 ST6GALNAC4Q9H4F1 302 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 UPF2Q9HAU5 1272 aaKnown RBP14.75□□□□□ -0.05
CHD3-207ENST00000466233 LTB4R2Q9NPC1 389 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 ANKFY1Q9P2R3 1169 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 TBX20Q9UMR3 447 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 DERAQ9Y315 318 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 PCDHGA2Q9Y5H1 932 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 GVINP1Q7Z2Y8 2422 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 VPS13AQ96RL7 3174 aa14.75□□□□□ -0.05
CHD3-207ENST00000466233 A0A0B4J269 797 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 FAM170BA6NMN3 283 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 SPTLC1O15269 473 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 OGTO15294 1046 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 FAM189A1O60320 539 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 FGF19O95750 216 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 GJB2P29033 226 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 PPP2R3AQ06190 1150 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 GPR17Q13304 367 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 MAML2Q8IZL2 1156 aaPredicted RBP14.74□□□□□ -0.05
CHD3-207ENST00000466233 NELL1Q92832 810 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 SMARCD2Q92925 531 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 MSANTD3Q96H12 275 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 ASB16Q96NS5 453 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 KXD1Q9BQD3 176 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 PARVGQ9HBI0 331 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 ASB3Q9Y575 518 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 NOTCH4Q99466 2003 aa14.74□□□□□ -0.05
CHD3-207ENST00000466233 HNRNPDLO14979 420 aaKnown RBP14.73□□□□□ -0.05
CHD3-207ENST00000466233 LAMTOR5O43504 91 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 SEC24AO95486 1093 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 CXCL8P10145 99 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 FCARP24071 287 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 LIG4P49917 911 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 GTF2BQ00403 316 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 ADCY1Q08828 1119 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 SMARCB1Q12824 385 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 SPATA1Q5VX52 437 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 MAP4K3Q8IVH8 894 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 MCRS1Q96EZ8 462 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 KIF12Q96FN5 646 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 BICD1Q96G01 975 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 CORO1BQ9BR76 489 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 TRMT61BQ9BVS5 477 aaKnown RBP14.73□□□□□ -0.05
CHD3-207ENST00000466233 FOXQ1Q9C009 403 aa14.73□□□□□ -0.05
CHD3-207ENST00000466233 CCSER1Q9C0I3 900 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms