RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 VARS2Q5ST30 1063 aaKnown RBP17.62■□□□□ 0.41
COL1A1-202ENST00000463440 PLCD3Q8N3E9 789 aa17.62■□□□□ 0.41
COL1A1-202ENST00000463440 APPL2Q8NEU8 664 aa17.62■□□□□ 0.41
COL1A1-202ENST00000463440 ACSF2Q96CM8 615 aaPredicted RBP17.62■□□□□ 0.41
COL1A1-202ENST00000463440 FGFBP2Q9BYJ0 223 aa17.62■□□□□ 0.41
COL1A1-202ENST00000463440 PRKD2Q9BZL6 878 aa17.62■□□□□ 0.41
COL1A1-202ENST00000463440 SCAND2PQ9GZW5 306 aaPredicted RBP17.62■□□□□ 0.41
COL1A1-202ENST00000463440 PIDD1Q9HB75 910 aa17.62■□□□□ 0.41
COL1A1-202ENST00000463440 IL18RAPO95256 599 aa17.61■□□□□ 0.41
COL1A1-202ENST00000463440 PAPLNO95428 1278 aa17.61■□□□□ 0.41
COL1A1-202ENST00000463440 NFICP08651 508 aa17.61■□□□□ 0.41
COL1A1-202ENST00000463440 SLFN14P0C7P3 912 aa17.61■□□□□ 0.41
COL1A1-202ENST00000463440 PAX3P23760 479 aa17.61■□□□□ 0.41
COL1A1-202ENST00000463440 CMA1P23946 247 aa17.61■□□□□ 0.41
COL1A1-202ENST00000463440 FAM26FQ5R3K3 315 aa17.61■□□□□ 0.41
COL1A1-202ENST00000463440 CRELD2Q6UXH1 353 aaPredicted RBP17.61■□□□□ 0.41
COL1A1-202ENST00000463440 UNC13DQ70J99 1090 aa17.61■□□□□ 0.41
COL1A1-202ENST00000463440 OTOP3Q7RTS5 596 aa17.61■□□□□ 0.41
COL1A1-202ENST00000463440 FEZF2Q8TBJ5 459 aa17.61■□□□□ 0.41
COL1A1-202ENST00000463440 ZNF707Q96C28 371 aaPredicted RBP17.61■□□□□ 0.41
COL1A1-202ENST00000463440 FAM213AQ9BRX8 229 aa17.61■□□□□ 0.41
COL1A1-202ENST00000463440 PCDHB8Q9UN66 801 aa17.61■□□□□ 0.41
COL1A1-202ENST00000463440 C2CD2Q9Y426 696 aa17.61■□□□□ 0.41
COL1A1-202ENST00000463440 PVALEFA0A1B0GWK0 134 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 FAM86C2PA6NEL3 165 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 EIF3DO15371 548 aaKnown RBP eCLIP17.6■□□□□ 0.41
COL1A1-202ENST00000463440 C8AP07357 584 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 HNRNPA1P09651 372 aaKnown RBP eCLIP17.6■□□□□ 0.41
COL1A1-202ENST00000463440 AFMP43652 599 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 GUCY2FP51841 1108 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 UVSSAQ2YD98 709 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 CTXN3Q4LDR2 81 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 PPM1LQ5SGD2 360 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 SLC8B1Q6J4K2 584 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 ZNF280DQ6N043 979 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 ARMCX5Q6P1M9 558 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 RSPO2Q6UXX9 243 aaPredicted RBP17.6■□□□□ 0.41
COL1A1-202ENST00000463440 DSTYKQ6XUX3 929 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 ZDHHC14Q8IZN3 488 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 EDAQ92838 391 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 HPS3Q969F9 1004 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 SAAL1Q96ER3 474 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 CHAMP1Q96JM3 812 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 LRFN3Q9BTN0 628 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 BLZF1Q9H2G9 400 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 WDR6Q9NNW5 1121 aaKnown RBP17.6■□□□□ 0.41
COL1A1-202ENST00000463440 USP25Q9UHP3 1055 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 SERTAD1Q9UHV2 236 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 C2orf16Q68DN1 1984 aa17.6■□□□□ 0.41
COL1A1-202ENST00000463440 CLUHO75153 1309 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.59■□□□□ 0.41
COL1A1-202ENST00000463440 A0A1B0GVL5 298 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 M0QZQ0 153 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 KIAA0391O15091 583 aaKnown RBP17.59■□□□□ 0.41
COL1A1-202ENST00000463440 PFKFB1P16118 471 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 HOXA9P31269 272 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 AARSP49588 968 aaKnown RBP eCLIP17.59■□□□□ 0.41
COL1A1-202ENST00000463440 MRPL58Q14197 206 aaKnown RBP17.59■□□□□ 0.41
COL1A1-202ENST00000463440 PTPN21Q16825 1174 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 C9orf57Q5W0N0 161 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 RTL10Q7L3V2 364 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 NT5DC4Q86YG4 428 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 TMEM130Q8N3G9 435 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 GLIS3Q8NEA6 775 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 ZNF461Q8TAF7 563 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 SLC7A14Q8TBB6 771 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 CBWD1Q9BRT8 395 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 C11orf16Q9NQ32 467 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 FBXL5Q9UKA1 691 aa17.59■□□□□ 0.41
COL1A1-202ENST00000463440 DENND4AQ7Z401 1863 aa17.58■□□□□ 0.41
COL1A1-202ENST00000463440 UBE4BO95155 1302 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 ARHGEF37A1IGU5 675 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 PRR33A8MZF0 331 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 TULP1O00294 542 aaPredicted RBP17.58■□□□□ 0.4
COL1A1-202ENST00000463440 ACTN4O43707 911 aaKnown RBP17.58■□□□□ 0.4
COL1A1-202ENST00000463440 EXTL3O43909 919 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 TBC1D4O60343 1298 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 XYLBO75191 536 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 CASP1P29466 404 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 ELF1P32519 619 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 ARPP19P56211 112 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 LILRA4P59901 499 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 ZXDAP98168 799 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 ROR1Q01973 937 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 YWHAHQ04917 246 aaPredicted RBP17.58■□□□□ 0.4
COL1A1-202ENST00000463440 CUL4BQ13620 913 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 EPM2AIP1Q7L775 607 aaPredicted RBP17.58■□□□□ 0.4
COL1A1-202ENST00000463440 USP37Q86T82 979 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 BRSK2Q8IWQ3 736 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 ZNF507Q8TCN5 953 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 NOC3LQ8WTT2 800 aaKnown RBP17.58■□□□□ 0.4
COL1A1-202ENST00000463440 OXCT2Q9BYC2 517 aaPredicted RBP17.58■□□□□ 0.4
COL1A1-202ENST00000463440 PCIF1Q9H4Z3 704 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 DPP3Q9NY33 737 aa17.58■□□□□ 0.4
COL1A1-202ENST00000463440 RBAKQ9NYW8 714 aaPredicted RBP17.58■□□□□ 0.4
COL1A1-202ENST00000463440 ANK1P16157 1881 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 ANO9A1A5B4 782 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 GOLGA8IPA6NC78 632 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 GOLGA8JA6NMD2 632 aa17.57■□□□□ 0.4
COL1A1-202ENST00000463440 PIRO00625 290 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms